SCOP 1.71: Domain d1vmkb_: 1vmk B:

Lineage for d1vmkb_ (1vmk B:)

1. Root: SCOP 1.71

2. Class c: Alpha and beta proteins (a/b) [51349] (134 folds)

3. Fold c.56: Phosphorylase/hydrolase-like [53162] (6 superfamilies)
   core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops

4. Superfamily c.56.2: Purine and uridine phosphorylases [53167] (1 family)
   complex architecture; contains mixed beta-sheet of 8 strands, order 23415867, strands 3, 6 & 7 are antiparallel to the rest; and barrel, closed; n=5, S=8

5. Family c.56.2.1: Purine and uridine phosphorylases [53168] (6 proteins)

6. Protein Purine nucleoside phosphorylase, PNP [53169] (9 species)

7. Species Thermotoga maritima [TaxId:243274] [117654] (1 PDB entry)

8. Domain d1vmkb_: 1vmk B: [113681]

Details for d1vmkb_

PDB Entry: 1vmk, 2.01 Å

PDB Description: Crystal structure of Purine nucleoside phosphorylase (TM1596) from Thermotoga maritima at 2.01 A resolution

SCOP Domain Sequences for d1vmkb_:

Sequence, based on SEQRES records:

>d1vmkb_ c.56.2.1 (B:) Purine nucleoside phosphorylase, PNP {Thermotoga maritima}
mmkkieeartfisertnlspdiliilgsgfgpfiekvedpviidykdiphfpqptveghs
gklvfgrisdkpvmimagrfhlyeghdpatvafpvylakyvgvkgvvvtnaagainpefk
pgeiilvrdiinfmfrnplrgpndekigprfpdmssvvdpewarkiqerlslkegvyigv
lgpsyetpaeirvfeklgadlvgmstvpeviaakhcglkvvvfscvtnmaagithgrlsh
eevvrttkmaqgkiekalttavevf

Sequence, based on observed residues (ATOM records):

>d1vmkb_ c.56.2.1 (B:) Purine nucleoside phosphorylase, PNP {Thermotoga maritima}
mmkkieeartfisertnlspdiliilgsgpfiekvedpviidykdiphfpgklvfgrisd
kpvmimagrfhlyeghdpatvafpvylakyvgvkgvvvtnaagainpefkpgeiilvrdi
infmfrnplrgpndekigprfpdmssvvdpewarkiqerlslkegvyigvlgpsyetpae
irvfeklgadlvgmstvpeviaakhcglkvvvfscvtnmaagisheevvrttkmaqgkie
kalttavevf

Timeline for d1vmkb_:

• d1vmkb_ is new in SCOP 1.71
  
• d1vmkb_ appears in SCOP 1.73
  
• d1vmkb_ appears in the current release, SCOPe 2.08