SCOPe 2.08: Domain d1v6ta_: 1v6t A:

Lineage for d1v6ta_ (1v6t A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.6: 7-stranded beta/alpha barrel [51988] (3 superfamilies)
   variant of beta/alpha barrel; parallel beta-sheet barrel, closed, n=7, S=8; strand order 1234567; some members may have fewer strands

4. Superfamily c.6.2: Glycoside hydrolase/deacetylase [88713] (9 families)
   in the different families beta-barrels are similarly distorted but may vary in the number of strands

5. Family c.6.2.5: LamB/YcsF-like [117449] (3 proteins)
   Pfam PF03746

6. Protein Hypothetical protein PH0986 [117452] (1 species)

7. Species Pyrococcus horikoshii [TaxId:53953] [117453] (1 PDB entry)
   Uniprot O58714

8. Domain d1v6ta_: 1v6t A: [113550]
   Structural genomics target

Details for d1v6ta_

PDB Entry: 1v6t, 1.7 Å

PDB Description: Crystal Structure of Lactam Utilization Protein from Pyrococcus horikoshii Ot3

PDB Compounds: (A:) Hypothetical UPF0271 protein PH0986

SCOPe Domain Sequences for d1v6ta_:

Sequence, based on SEQRES records:

>d1v6ta_ c.6.2.5 (A:) Hypothetical protein PH0986 {Pyrococcus horikoshii [TaxId: 53953]}
mrvdlnsdlgesfgryklgldeevmkyitsanvacgwhagdplvmrktvrlakendvqvg
ahpgypdlmgfgrrymkltpeearnyilyqvgalyafakaeglelqhvkphgalynamvk
eedlaraviegildfdkdlilvtlsnsrvadiaeemglkvahevfadraynpdgtlvprg
rpgaviedkeeiaervismvkdggiraingewvdlkvdticvhgdnpkaveitsyirkvl
eeegvkivpmkefi

Sequence, based on observed residues (ATOM records):

>d1v6ta_ c.6.2.5 (A:) Hypothetical protein PH0986 {Pyrococcus horikoshii [TaxId: 53953]}
mrvdlnsdlgesfgryklgldeevmkyitsanvacgwhagdplvmrktvrlakendvqvg
ahpgypdlmgfgrrymkltpeearnyilyqvgalyafakaeglelqhvkphgalynamvk
eedlaraviegildfdkdlilvtlsnsrvadiaeemglkvahevfadraynpdgtlvpav
iedkeeiaervismvkdggiraingewvdlkvdticvhgdnpkaveitsyirkvleeegv
kivpmkefi

Timeline for d1v6ta_:

• d1v6ta_ first appeared in SCOP 1.71
  
• d1v6ta_ appears in SCOPe 2.07