SCOPe 2.04: Domain d1up4e1: 1up4 E:1-162

Lineage for d1up4e1 (1up4 E:1-162)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.5: LDH N-terminal domain-like [51848] (9 proteins)

6. Protein 6-phospho-beta-glucosidase [110428] (2 species)

7. Species Thermotoga maritima [TaxId:2336] [110430] (3 PDB entries)
   Uniprot Q9X108

8. Domain d1up4e1: 1up4 E:1-162 [113366]
   Other proteins in same PDB: d1up4a2, d1up4b2, d1up4c2, d1up4d2, d1up4e2, d1up4f2, d1up4g2, d1up4h2

Details for d1up4e1

PDB Entry: 1up4, 2.85 Å

PDB Description: structure of the 6-phospho-beta glucosidase from thermotoga maritima at 2.85 angstrom resolution in the monoclinic form

PDB Compounds: (E:) 6-phospho-beta-glucosidase

SCOPe Domain Sequences for d1up4e1:

Sequence; same for both SEQRES and ATOM records:

>d1up4e1 c.2.1.5 (E:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}
mriavigggssytpelvkglldisedvridevifydideekqkivvdfvkrlvkdrfkvl
isdtfegavvdakyvifqfrpgglkgrendegiplkygligqettgvggfsaalrafpiv
eeyvdtvrktsnativnftnpsghitefvrnyleyekfiglc

Timeline for d1up4e1:

• d1up4e1 first appeared in SCOP 1.71
  
• d1up4e1 appears in SCOPe 2.03
  
• d1up4e1 appears in SCOPe 2.05
  
• d1up4e1 appears in the current release, SCOPe 2.08