SCOPe 2.05: Domain d1up4b2: 1up4 B:163-415

Lineage for d1up4b2 (1up4 B:163-415)

1. Root: SCOPe 2.05

2. Class d: Alpha and beta proteins (a+b) [53931] (381 folds)

3. Fold d.162: LDH C-terminal domain-like [56326] (1 superfamily)
   unusual fold, defines family

4. Superfamily d.162.1: LDH C-terminal domain-like [56327] (3 families)

5. Family d.162.1.2: AglA-like glucosidase [90050] (5 proteins)
   family 4 glycosyl hydrolase
   automatically mapped to Pfam PF11975

6. Protein 6-phospho-beta-glucosidase [111254] (2 species)

7. Species Thermotoga maritima [TaxId:2336] [111256] (3 PDB entries)
   Uniprot Q9X108

8. Domain d1up4b2: 1up4 B:163-415 [113361]
   Other proteins in same PDB: d1up4a1, d1up4b1, d1up4c1, d1up4d1, d1up4e1, d1up4f1, d1up4g1, d1up4h1

Details for d1up4b2

PDB Entry: 1up4, 2.85 Å

PDB Description: structure of the 6-phospho-beta glucosidase from thermotoga maritima at 2.85 angstrom resolution in the monoclinic form

PDB Compounds: (B:) 6-phospho-beta-glucosidase

SCOPe Domain Sequences for d1up4b2:

Sequence, based on SEQRES records:

>d1up4b2 d.162.1.2 (B:163-415) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}
nvpinfireiaemfsarledvflkyyglnhlsfiekvfvkgedvtekvfenlklklsnip
dedfptwfydsvrlivnpylryylmekkmfkkisthelrarevmkiekelfekyrtavei
peeltkrggsmystaaahlirdletdegkihivntrnngsienlpddyvleipcyvrsgr
vhtlsqgkgdhfalsfihavkmyerltieaylkrskklalkallshplgpdvedakdlle
eileanreyvklg

Sequence, based on observed residues (ATOM records):

>d1up4b2 d.162.1.2 (B:163-415) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}
nvpinfireiaemfsarledvflkyyglnhlsfiekvfvkgedvtekvfenlklkedfpt
wfydsvrlivnpylryylmekkmfkkisthelrarevmkiekelfekyrtaveipeesmy
staaahlirdletdegkihivntrnngsienlpddyvleipcyvrsgrvhtlsqgkgdhf
alsfihavkmyerltieaylkrskklalkallshplgpdvedakdlleeileanreyvkl
g

Timeline for d1up4b2:

• d1up4b2 first appeared in SCOP 1.71
  
• d1up4b2 appears in SCOPe 2.04
  
• d1up4b2 appears in SCOPe 2.06
  
• d1up4b2 appears in the current release, SCOPe 2.08