SCOPe 2.03: Domain d1u8vd1: 1u8v D:276-490

Lineage for d1u8vd1 (1u8v D:276-490)

1. Root: SCOPe 2.03

2. Class a: All alpha proteins [46456] (284 folds)

3. Fold a.29: Bromodomain-like [47363] (15 superfamilies)
   4 helices; bundle; minor mirror variant of up-and-down topology

4. Superfamily a.29.3: Acyl-CoA dehydrogenase C-terminal domain-like [47203] (3 families)
   multidomain flavoprotein; N-terminal domain is all-alpha; the middle domain is open (5,8) barrel

5. Family a.29.3.1: Medium chain acyl-CoA dehydrogenase-like, C-terminal domain [47204] (10 proteins)

6. Protein 4-hydroxybutyryl-CoA dehydratase AbfD, C-terminal domain [116883] (1 species)

7. Species Clostridium aminobutyricum [TaxId:33953] [116884] (1 PDB entry)
   Uniprot P55792

8. Domain d1u8vd1: 1u8v D:276-490 [113202]
   Other proteins in same PDB: d1u8va2, d1u8vb2, d1u8vc2, d1u8vd2
   complexed with fad, sf4

Details for d1u8vd1

PDB Entry: 1u8v, 1.6 Å

PDB Description: crystal structure of 4-hydroxybutyryl-coa dehydratase from clostridium aminobutyricum: radical catalysis involving a [4fe-4s] cluster and flavin

PDB Compounds: (D:) Gamma-aminobutyrate metabolism dehydratase/isomerase

SCOPe Domain Sequences for d1u8vd1:

Sequence; same for both SEQRES and ATOM records:

>d1u8vd1 a.29.3.1 (D:276-490) 4-hydroxybutyryl-CoA dehydratase AbfD, C-terminal domain {Clostridium aminobutyricum [TaxId: 33953]}
qeydfagmmverfagyhrqsyggckvgvgdvvigaaalaadyngaqkashvkdkliemth
lnetlyccgiacsaegyptaagnyqidlllanvckqnitrfpyeivrlaediagglmvtm
pseadfksetvvgrdgetigdfcnkffaaaptctteermrvlrfleniclgasavgyrte
smhgagspqaqrimiarqgninakkelakaiagik

Timeline for d1u8vd1:

• d1u8vd1 first appeared in SCOP 1.71
  
• d1u8vd1 appears in SCOPe 2.02
  
• d1u8vd1 appears in SCOPe 2.04
  
• d1u8vd1 appears in the current release, SCOPe 2.08