Lineage for d1sbrb_ (1sbr B:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2516578Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2522459Superfamily d.58.48: MTH1187/YkoF-like [89957] (3 families) (S)
  5. 2522485Family d.58.48.2: Putative thiamin/HMP-binding protein YkoF [110987] (1 protein)
    duplication: one subunit consists of two domains assembled as in the MHT1178-like dimer
  6. 2522486Protein Putative thiamin/HMP-binding protein YkoF [110988] (1 species)
  7. 2522487Species Bacillus subtilis [TaxId:1423] [110989] (3 PDB entries)
    Uniprot O34911
  8. 2522495Domain d1sbrb_: 1sbr B: [112067]
    complexed with ca, vib

Details for d1sbrb_

PDB Entry: 1sbr (more details), 2.3 Å

PDB Description: The structure and function of B. subtilis YkoF gene product: the complex with thiamin
PDB Compounds: (B:) ykoF

SCOPe Domain Sequences for d1sbrb_:

Sequence, based on SEQRES records: (download)

>d1sbrb_ d.58.48.2 (B:) Putative thiamin/HMP-binding protein YkoF {Bacillus subtilis [TaxId: 1423]}
riagfrfslypmtddfisviksalaatdtskvwtktdhistvlrgsidhvfdaakaiylh
aanseqhivmngtfsigcpgdtqgdtylskgdkrvnedavrglkaeapcqfalypmnepd
ymglimeavdiakaqgtfvqgvhyaseldgdahdvfstleavfrmaeqqtnhitmtvnls
ansp

Sequence, based on observed residues (ATOM records): (download)

>d1sbrb_ d.58.48.2 (B:) Putative thiamin/HMP-binding protein YkoF {Bacillus subtilis [TaxId: 1423]}
riagfrfslypmtddfisviksalaatdtskvwtktdhistvlrgsidhvfdaakaiylh
aanseqhivmngtfsigcpgdtqgdtylsdkrvnedavrglkaeapcqfalypmnepdym
glimeavdiakaqgtfvqgvhyaseldgdahdvfstleavfrmaeqqtnhitmtvnlsan
sp

SCOPe Domain Coordinates for d1sbrb_:

Click to download the PDB-style file with coordinates for d1sbrb_.
(The format of our PDB-style files is described here.)

Timeline for d1sbrb_: