SCOPe 2.08: Domain d1rrlb1: 1rrl B:168-857

Lineage for d1rrlb1 (1rrl B:168-857)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.119: Lipoxigenase [48483] (1 superfamily)
   multihelical
   large nearly all-alpha domain

4. Superfamily a.119.1: Lipoxigenase [48484] (3 families)

5. Family a.119.1.1: Plant lipoxigenases [48485] (2 proteins)
   automatically mapped to Pfam PF00305

6. Protein Lipoxigenase, C-terminal domain [48486] (2 species)
   N-terminal domain is beta-sandwich similar to colipase-binding domain of pancreatic lipase
   contains alpha plus beta subdomain: res. 341-495; alpha-beta(5)-alpha

7. Species Soybean (Glycine max), isozyme L3 [TaxId:3847] [48488] (10 PDB entries)
   Uniprot P09186

8. Domain d1rrlb1: 1rrl B:168-857 [111928]
   Other proteins in same PDB: d1rrla2, d1rrlb2
   complexed with fe2

Details for d1rrlb1

PDB Entry: 1rrl, 2.09 Å

PDB Description: soybean lipoxygenase (lox-3) at 93k at 2.0 a resolution

PDB Compounds: (B:) Seed lipoxygenase-3

SCOPe Domain Sequences for d1rrlb1:

Sequence; same for both SEQRES and ATOM records:

>d1rrlb1 a.119.1.1 (B:168-857) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L3 [TaxId: 3847]}
lpsetpaplvkyreeelhnlrgdgtgerkeweriydydvyndlgdpdkgenharpvlggn
dtfpyprrgrtgrkptrkdpnsesrsndvylprdeafghlkssdfltyglksvsqnvlpl
lqsafdlnftprefdsfdevhglysggiklptdiiskisplpvlkeifrtdgeqalkfpp
pkviqvsksawmtdeefaremlagvnpnlirclkdfpprskldsqvygdhtsqitkehle
pnlegltvdeaiqnkrlflldhhdpimpylrrinatstkayatrtilflkndgtlrplai
elslphpqgdqsgafsqvflpadegvessiwllakayvvvndscyhqlvshwlnthavve
pfiiatnrhlsvvhpiykllhphyrdtmninglarlslvndggvieqtflwgrysvemsa
vvykdwvftdqalpadlikrgmaiedpscphgirlviedypytvdgleiwdaiktwvhey
vflyyksddtlredpelqacwkelvevghgdkknepwwpkmqtreelveacaiiiwtasa
lhaavnfgqypygglilnrptlsrrfmpekgsaeyeelrknpqkaylktitpkfqtlidl
svieilsrhasdevylgerdnpnwtsdtraleafkrfgnklaqienklsernndeklrnr
cgpvqmpytlllpsskegltfrgipnsisi

Timeline for d1rrlb1:

• d1rrlb1 first appeared in SCOP 1.71
  
• d1rrlb1 appears in SCOPe 2.07