Lineage for d1rgq.2 (1rgq B:,C:)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2794584Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
    barrel, closed; n=6, S=8; greek-key
    duplication: consists of two domains of the same fold
  4. 2794585Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families) (S)
  5. 2797067Family b.47.1.3: Viral proteases [50596] (5 proteins)
    beta sheet in the first domain is opened rather than forms a barrel
  6. 2797068Protein NS3 protease [50600] (5 species)
  7. 2797078Species Human hepatitis C virus (HCV), different isolates [TaxId:11103] [50601] (14 PDB entries)
    Uniprot P27958 1027-1206,1678-1669
    Uniprot P26662 1029-1202,1677-1689
    Uniprot O36579 1054-1207
  8. 2797103Domain d1rgq.2: 1rgq B:,C: [111804]
    complexed with akp, zn

Details for d1rgq.2

PDB Entry: 1rgq (more details), 2.9 Å

PDB Description: M9A HCV Protease complex with pentapeptide keto-amide inhibitor
PDB Compounds: (B:) NS3 protease, (C:) ns4a peptide

SCOPe Domain Sequences for d1rgq.2:

Sequence; same for both SEQRES and ATOM records: (download)

>g1rgq.2 b.47.1.3 (B:,C:) NS3 protease {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}

SCOPe Domain Coordinates for d1rgq.2:

Click to download the PDB-style file with coordinates for d1rgq.2.
(The format of our PDB-style files is described here.)

Timeline for d1rgq.2: