SCOPe 2.08: Domain d1rd5b_: 1rd5 B:

Lineage for d1rd5b_ (1rd5 B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.2: Ribulose-phoshate binding barrel [51366] (7 families)

5. Family c.1.2.4: Tryptophan biosynthesis enzymes [51381] (4 proteins)

6. Protein Trp synthase alpha-subunit [51388] (9 species)

7. Species Maize (Zea mays) [TaxId:4577] [117361] (2 PDB entries)
   Uniprot P42390

8. Domain d1rd5b_: 1rd5 B: [111773]
   complexed with mla

Details for d1rd5b_

PDB Entry: 1rd5, 2.02 Å

PDB Description: crystal structure of tryptophan synthase alpha chain homolog bx1: a member of the chemical plant defense system

PDB Compounds: (B:) Tryptophan synthase alpha chain, chloroplast

SCOPe Domain Sequences for d1rd5b_:

Sequence, based on SEQRES records:

>d1rd5b_ c.1.2.4 (B:) Trp synthase alpha-subunit {Maize (Zea mays) [TaxId: 4577]}
srpvsdtmaalmakgktafipyitagdpdlattaealrlldgcgadvielgvpcsdpyid
gpiiqasvaralasgttmdavlemlrevtpelscpvvllsyykpimfrslakmkeagvhg
livpdlpyvaahslwseaknnnlelvllttpaipedrmkeitkasegfvylvsvngvtgp
ranvnprvesliqevkkvtnkpvavgfgiskpehvkqiaqwgadgviigsamvrqlgeaa
spkqglrrleeyargmknalg

Sequence, based on observed residues (ATOM records):

>d1rd5b_ c.1.2.4 (B:) Trp synthase alpha-subunit {Maize (Zea mays) [TaxId: 4577]}
srpvsdtmaalmakgktafipyitagdpdlattaealrlldgcgadvielgvpcsdpdgp
iiqasvaralasgttmdavlemlrevtpelscpvvllsyykpimfrslakmkeagvhgli
vpdlpyvaahslwseaknnnlelvllttpaipedrmkeitkasegfvylvsvprvesliq
evkkvtnkpvavgfgiskpehvkqiaqwgadgviigsamvrqlgeaaspkqglrrleeya
rgmknalg

Timeline for d1rd5b_:

• d1rd5b_ first appeared in SCOP 1.71
  
• d1rd5b_ appears in SCOPe 2.07