Lineage for d1ra5a2 (1ra5 A:56-375)

  1. Root: SCOP 1.71
  2. 570216Class c: Alpha and beta proteins (a/b) [51349] (134 folds)
  3. 570217Fold c.1: TIM beta/alpha-barrel [51350] (32 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 572244Superfamily c.1.9: Metallo-dependent hydrolases [51556] (13 families) (S)
    the beta-sheet barrel is similarly distorted and capped by a C-terminal helix
    has transition metal ions bound inside the barrel
  5. 572353Family c.1.9.5: Cytosine deaminase catalytic domain [69390] (1 protein)
  6. 572354Protein Cytosine deaminase catalytic domain [69391] (1 species)
  7. 572355Species Escherichia coli [TaxId:562] [69392] (8 PDB entries)
  8. 572359Domain d1ra5a2: 1ra5 A:56-375 [111760]
    Other proteins in same PDB: d1ra5a1
    complexed with fe, fpy, gol; mutant

Details for d1ra5a2

PDB Entry: 1ra5 (more details), 1.4 Å

PDB Description: bacterial cytosine deaminase d314a mutant bound to 5-fluoro-4-(s)- hydroxyl-3,4-dihydropyrimidine.

SCOP Domain Sequences for d1ra5a2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ra5a2 c.1.9.5 (A:56-375) Cytosine deaminase catalytic domain {Escherichia coli}
pfvephihldttqtagqpnwnqsgtlfegierwaerkallthddvkqrawqtlkwqiang
iqhvrthvdvsdatltalkamlevkqevapwidlqivafpqegilsypngealleealrl
gadvvgaiphfeftreygveslhktfalaqkydrlidvhcdeiddeqsrfvetvaalahh
egmgarvtashttamhsyngaytsrlfrllkmsginfvanplvnihlqgrfdtypkrrgi
trvkemlesginvcfghdavfdpwyplgtanmlqvlhmglhvcqlmgygqindglnlith
hsartlnlqdygiaagnsan

SCOP Domain Coordinates for d1ra5a2:

Click to download the PDB-style file with coordinates for d1ra5a2.
(The format of our PDB-style files is described here.)

Timeline for d1ra5a2:

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Domains from same chain:
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d1ra5a1