Lineage for d1r34a3 (1r34 A:31-411)

  1. Root: SCOP 1.71
  2. 570216Class c: Alpha and beta proteins (a/b) [51349] (134 folds)
  3. 577009Fold c.6: 7-stranded beta/alpha barrel [51988] (3 superfamilies)
    variant of beta/alpha barrel; parallel beta-sheet barrel, closed, n=7, S=8; strand order 1234567; some members may have fewer strands
  4. 577051Superfamily c.6.2: Glycoside hydrolase/deacetylase [88713] (5 families) (S)
    in the different families beta-barrels are similarly distorted but may vary in the number of strands
  5. 577052Family c.6.2.1: alpha-mannosidase [88714] (2 proteins)
    family 38 glycoside hydrolase; overall domain organization is similar to that of the 4-alpha-glucanotransferase family
  6. 577053Protein Golgi alpha-mannosidase II [88715] (1 species)
  7. 577054Species Fruit fly (Drosophila melanogaster) [TaxId:7227] [88716] (9 PDB entries)
  8. 577060Domain d1r34a3: 1r34 A:31-411 [111672]
    Other proteins in same PDB: d1r34a1, d1r34a2
    complexed with lks, mpd, nag, zn

Details for d1r34a3

PDB Entry: 1r34 (more details), 1.95 Å

PDB Description: Golgi alpha-mannosidase II complex with 5-thio-D-mannopyranosylamidinium salt

SCOP Domain Sequences for d1r34a3:

Sequence; same for both SEQRES and ATOM records: (download)

>d1r34a3 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster)}
cqdvvqdvpnvdvqmlelydrmsfkdidggvwkqgwnikydplkynahhklkvfvvphsh
ndpgwiqtfeeyyqhdtkhilsnalrhlhdnpemkfiwaeisyfarfyhdlgenkklqmk
sivkngqlefvtggwvmpdeanshwrnvllqltegqtwlkqfmnvtptaswaidpfghsp
tmpyilqksgfknmliqrthysvkkelaqqrqleflwrqiwdnkgdtalfthmmpfysyd
iphtcgpdpkvccqfdfkrmgsfglscpwkvpprtisdqnvaarsdllvdqwkkkaelyr
tnvlliplgddfrfkqntewdvqrvnyerlfehinsqahfnvqaqfgtlqeyfdavhqae
ragqaefptlsgdfftyadrs

SCOP Domain Coordinates for d1r34a3:

Click to download the PDB-style file with coordinates for d1r34a3.
(The format of our PDB-style files is described here.)

Timeline for d1r34a3: