SCOPe 2.07: Protein: DNA polymerase iota

Lineage for Protein: DNA polymerase iota

Root: SCOPe 2.07
Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)
Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
Superfamily e.8.1: DNA/RNA polymerases [56672] (8 families)
"palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain

Family e.8.1.7: Lesion bypass DNA polymerase (Y-family), catalytic domain [100888] (5 proteins)
contains a distinct 'fingers' domain possibly related to the C-terminal subdomain of hypothetical protein Ta1206 (1qw2)

Protein DNA polymerase iota [111295] (1 species)

Species:

Human (Homo sapiens) [TaxId:9606] [111296] (19 PDB entries)
Uniprot Q9UNA4
1. Domains for 1t3n:
  1. Domain d1t3na2: 1t3n A:27-299 [106364]
    Other proteins in same PDB: d1t3na1, d1t3nb1
    protein/DNA complex; complexed with mg, ttp
  2. Domain d1t3nb2: 1t3n B:447-719 [106366]
    Other proteins in same PDB: d1t3na1, d1t3nb1
    protein/DNA complex; complexed with mg, ttp
2. Domain for 1zet:
  - Domain d1zeta2: 1zet A:27-299 [124998]
    Other proteins in same PDB: d1zeta1
    automated match to d1t3na2
    protein/DNA complex; complexed with mg, ttp
3. Domain for 2alz:
  - Domain d2alza2: 2alz A:25-299 [126995]
    Other proteins in same PDB: d2alza1
    protein/DNA complex; complexed with dcp, mg
4. Domain for 2dpi:
  - Domain d2dpia2: 2dpi A:26-299 [131613]
    Other proteins in same PDB: d2dpia1
    protein/DNA complex; complexed with dcp, mg
5. Domain for 2dpj:
  - Domain d2dpja2: 2dpj A:25-299 [131615]
    Other proteins in same PDB: d2dpja1
    protein/DNA complex; complexed with mg, ttp
6. Domain for 2fll:
  - Domain d2flla2: 2fll A:25-299 [133728]
    Other proteins in same PDB: d2flla1
    protein/DNA complex; complexed with mg, ttp
7. Domain for 2fln:
  - Domain d2flna2: 2fln A:26-299 [133732]
    Other proteins in same PDB: d2flna1
    protein/DNA complex
8. Domain for 2flp:
  - Domain d2flpa2: 2flp A:26-299 [133746]
    Other proteins in same PDB: d2flpa1
    protein/DNA complex
9. Domain for 3g6x:
  - Domain d3g6xa1: 3g6x A:25-299 [232245]
    Other proteins in same PDB: d3g6xa2
    automated match to d2dpja2
    protein/DNA complex; complexed with dgt, mg
10. Domains for 3gv5:
  1. Domain d3gv5b1: 3gv5 B:28-299 [232315]
    Other proteins in same PDB: d3gv5b2, d3gv5d2
    automated match to d2dpia2
    protein/DNA complex; complexed with adi, ca, gol
  2. Domain d3gv5d1: 3gv5 D:26-299 [232319]
    Other proteins in same PDB: d3gv5b2, d3gv5d2
    automated match to d2dpia2
    protein/DNA complex; complexed with adi, ca, gol
11. Domain for 3gv7:
  - Domain d3gv7b1: 3gv7 B:26-299 [232317]
    Other proteins in same PDB: d3gv7b2
    automated match to d2dpia2
    protein/DNA complex; complexed with mg, ttp
12. Domain for 3gv8:
  - Domain d3gv8b1: 3gv8 B:26-299 [232321]
    Other proteins in same PDB: d3gv8b2
    automated match to d2dpia2
    protein/DNA complex; complexed with dgt, mg
13. Domain for 3h40:
  - Domain d3h40a1: 3h40 A:26-299 [232369]
    Other proteins in same PDB: d3h40a2
    automated match to d1t3na2
    protein/DNA complex; complexed with so4
14. Domain for 3h4b:
  - Domain d3h4ba1: 3h4b A:25-299 [232372]
    Other proteins in same PDB: d3h4ba2
    automated match to d2alza2
    protein/DNA complex; complexed with dtp, mg
15. Domain for 3h4d:
  - Domain d3h4da1: 3h4d A:25-299 [232373]
    Other proteins in same PDB: d3h4da2
    automated match to d2alza2
    protein/DNA complex; complexed with dgt, mg
16. Domain for 3ngd:
  - Domain d3ngda1: 3ngd A:26-299 [233028]
    Other proteins in same PDB: d3ngda2
    automated match to d2dpia2
    protein/DNA complex; complexed with dcp
17. Domain for 4ebc:
  - Domain d4ebca1: 4ebc A:26-299 [234369]
    Other proteins in same PDB: d4ebca2
    automated match to d2dpia2
    protein/DNA complex; complexed with 0oh, ca, gol
18. Domain for 4ebd:
  - Domain d4ebda1: 4ebd A:26-299 [234371]
    Other proteins in same PDB: d4ebda2
    automated match to d2dpia2
    protein/DNA complex; complexed with 0oj, ca, gol
19. Domain for 4ebe:
  - Domain d4ebea1: 4ebe A:26-299 [234370]
    Other proteins in same PDB: d4ebea2
    automated match to d2dpia2
    protein/DNA complex; complexed with ca, dtp, gol

More info for Protein DNA polymerase iota from e.8.1.7: Lesion bypass DNA polymerase (Y-family), catalytic domain

Timeline for Protein DNA polymerase iota from e.8.1.7: Lesion bypass DNA polymerase (Y-family), catalytic domain:

Protein DNA polymerase iota from e.8.1.7: Lesion bypass DNA polymerase (Y-family), catalytic domain first appeared in SCOP 1.69
Protein DNA polymerase iota from e.8.1.7: Lesion bypass DNA polymerase (Y-family), catalytic domain appears in SCOPe 2.06
Protein DNA polymerase iota from e.8.1.7: Lesion bypass DNA polymerase (Y-family), catalytic domain appears in the current release, SCOPe 2.08