SCOPe 2.04: Protein: Peptidylarginine deiminase Pad4, catalytic C-terminal domain

Lineage for Protein: Peptidylarginine deiminase Pad4, catalytic C-terminal domain

Root: SCOPe 2.04
Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
Fold d.126: Pentein, beta/alpha-propeller [55908] (1 superfamily)
duplication: composed of 5 alpha-beta(2)-alpha-beta units arranged around pseudo fivefold axis
Superfamily d.126.1: Pentein [55909] (8 families)

Family d.126.1.5: Peptidylarginine deiminase Pad4, catalytic C-terminal domain [111152] (1 protein)
# functionally related to the amidinotransferase, similar active sites
automatically mapped to Pfam PF03068

Protein Peptidylarginine deiminase Pad4, catalytic C-terminal domain [111153] (1 species)

Species:

Human (Homo sapiens) [TaxId:9606] [111154] (12 PDB entries)
Uniprot Q9UM07
1. Domain for 1wd8:
  - Domain d1wd8a3: 1wd8 A:294-663 [109239]
    Other proteins in same PDB: d1wd8a1, d1wd8a2
2. Domain for 1wd9:
  - Domain d1wd9a3: 1wd9 A:294-663 [109242]
    Other proteins in same PDB: d1wd9a1, d1wd9a2
    complexed with ca, so4
3. Domain for 1wda:
  - Domain d1wdaa3: 1wda A:294-663 [109245]
    Other proteins in same PDB: d1wdaa1, d1wdaa2
    complexed with bag, ca, so4
4. Domain for 2dew:
  - Domain d2dewx3: 2dew X:294-663 [131435]
    Other proteins in same PDB: d2dewx1, d2dewx2
    automatically matched to d1wd8a3
    complexed with ca, so4
5. Domain for 2dex:
  - Domain d2dexx3: 2dex X:294-663 [131438]
    Other proteins in same PDB: d2dexx1, d2dexx2
    automatically matched to d1wd8a3
    complexed with ca, so4
6. Domain for 2dey:
  - Domain d2deyx3: 2dey X:294-663 [131441]
    Other proteins in same PDB: d2deyx1, d2deyx2
    automatically matched to d1wd8a3
    complexed with ca, so4
7. Domain for 2dw5:
  - Domain d2dw5a3: 2dw5 A:294-663 [131807]
    Other proteins in same PDB: d2dw5a1, d2dw5a2
    automated match to d2dw5a3
    complexed with bfb, ca, so4
8. Domain for 3apm:
  - Domain d3apma3: 3apm A:294-663 [245186]
    Other proteins in same PDB: d3apma1, d3apma2
    automated match to d1wd8a3
9. Domain for 3apn:
  - Domain d3apna3: 3apn A:294-663 [245189]
    Other proteins in same PDB: d3apna1, d3apna2
    automated match to d1wd8a3
10. Domain for 3b1t:
  - Domain d3b1ta3: 3b1t A:294-663 [245355]
    Other proteins in same PDB: d3b1ta1, d3b1ta2
    automated match to d1wd8a3
    complexed with ca, so4, ycl
11. Domain for 3b1u:
  - Domain d3b1ua3: 3b1u A:294-663 [245358]
    Other proteins in same PDB: d3b1ua1, d3b1ua2
    automated match to d1wd8a3
    complexed with ca, so4, yff
12. Domain for 4dkt:
  - Domain d4dkta3: 4dkt A:294-663 [251476]
    Other proteins in same PDB: d4dkta1, d4dkta2
    automated match to d1wd8a3
    complexed with ca, edo, so4

More info for Protein Peptidylarginine deiminase Pad4, catalytic C-terminal domain from d.126.1.5: Peptidylarginine deiminase Pad4, catalytic C-terminal domain

Timeline for Protein Peptidylarginine deiminase Pad4, catalytic C-terminal domain from d.126.1.5: Peptidylarginine deiminase Pad4, catalytic C-terminal domain:

Protein Peptidylarginine deiminase Pad4, catalytic C-terminal domain from d.126.1.5: Peptidylarginine deiminase Pad4, catalytic C-terminal domain first appeared in SCOP 1.69
Protein Peptidylarginine deiminase Pad4, catalytic C-terminal domain from d.126.1.5: Peptidylarginine deiminase Pad4, catalytic C-terminal domain appears in SCOPe 2.03
Protein Peptidylarginine deiminase Pad4, catalytic C-terminal domain from d.126.1.5: Peptidylarginine deiminase Pad4, catalytic C-terminal domain appears in SCOPe 2.05
Protein Peptidylarginine deiminase Pad4, catalytic C-terminal domain from d.126.1.5: Peptidylarginine deiminase Pad4, catalytic C-terminal domain appears in the current release, SCOPe 2.08