SCOPe 2.08: Protein: Nicotinate phosphoribosyltransferase, C-terminal domain

Lineage for Protein: Nicotinate phosphoribosyltransferase, C-terminal domain

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.17: Nicotinate/Quinolinate PRTase C-terminal domain-like [51690] (3 families)
incomplete beta/alpha barrel with parallel beta-sheet of 7 strands
Family c.1.17.2: Nicotinate phosphoribosyltransferase C-terminal domain-like [110910] (2 proteins)
automatically mapped to Pfam PF04095
Protein Nicotinate phosphoribosyltransferase, C-terminal domain [110911] (5 species)

Species:

Agrobacterium tumefaciens [TaxId:358] [117391] (1 PDB entry)
Uniprot Q8UIS9
- Domains for 1ybe:
  1. Domain d1ybea1: 1ybe A:168-433 [116605]
    Other proteins in same PDB: d1ybea2, d1ybeb2
    Structural genomics target
  2. Domain d1ybeb1: 1ybe B:168-433 [116607]
    Other proteins in same PDB: d1ybea2, d1ybeb2
    Structural genomics target
Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [110912] (1 PDB entry)
Uniprot P39683
- Domains for 1vlp:
  1. Domain d1vlpa2: 1vlp A:150-415 [108841]
    Other proteins in same PDB: d1vlpa1, d1vlpa3, d1vlpb1, d1vlpc1, d1vlpc3, d1vlpd1, d1vlpd3
    Structural genomics target
    complexed with cl, edo, mes, po4
  2. Domain d1vlpb2: 1vlp B:150-415 [108843]
    Other proteins in same PDB: d1vlpa1, d1vlpa3, d1vlpb1, d1vlpc1, d1vlpc3, d1vlpd1, d1vlpd3
    Structural genomics target
    complexed with cl, edo, mes, po4
  3. Domain d1vlpc2: 1vlp C:150-415 [108845]
    Other proteins in same PDB: d1vlpa1, d1vlpa3, d1vlpb1, d1vlpc1, d1vlpc3, d1vlpd1, d1vlpd3
    Structural genomics target
    complexed with cl, edo, mes, po4
  4. Domain d1vlpd2: 1vlp D:150-415 [108847]
    Other proteins in same PDB: d1vlpa1, d1vlpa3, d1vlpb1, d1vlpc1, d1vlpc3, d1vlpd1, d1vlpd3
    Structural genomics target
    complexed with cl, edo, mes, po4
Mouse (Mus musculus) [TaxId:10090] [419580] (2 PDB entries)
1. Domains for 2h3b:
  1. Domain d2h3ba2: 2h3b A:164-480 [412857]
    Other proteins in same PDB: d2h3ba1, d2h3bb1
    complexed with so4
  2. Domain d2h3bb2: 2h3b B:164-483 [412859]
    Other proteins in same PDB: d2h3ba1, d2h3bb1
    automated match to d2h3ba2
    complexed with so4
2. Domains for 2h3d:
  1. Domain d2h3da2: 2h3d A:164-483 [412861]
    Other proteins in same PDB: d2h3da1, d2h3db1
    automated match to d2h3ba2
    complexed with nmn
  2. Domain d2h3db2: 2h3d B:164-483 [412863]
    Other proteins in same PDB: d2h3da1, d2h3db1
    automated match to d2h3ba2
    complexed with nmn
Porphyromonas gingivalis [TaxId:837] [225160] (1 PDB entry)
- Domains for 2im5:
  1. Domain d2im5a2: 2im5 A:138-391 [204812]
    Other proteins in same PDB: d2im5a1, d2im5b1, d2im5c1, d2im5d1
    automated match to d1vlpa2
  2. Domain d2im5b2: 2im5 B:138-391 [204814]
    Other proteins in same PDB: d2im5a1, d2im5b1, d2im5c1, d2im5d1
    automated match to d1vlpa2
  3. Domain d2im5c2: 2im5 C:138-391 [204816]
    Other proteins in same PDB: d2im5a1, d2im5b1, d2im5c1, d2im5d1
    automated match to d1vlpa2
  4. Domain d2im5d2: 2im5 D:138-391 [204818]
    Other proteins in same PDB: d2im5a1, d2im5b1, d2im5c1, d2im5d1
    automated match to d1vlpa2
Pseudomonas aeruginosa [TaxId:287] [141863] (1 PDB entry)
Uniprot Q9HW26 143-397
NAPRTase 2
- Domains for 1yir:
  1. Domain d1yira1: 1yir A:145-399 [123330]
    Other proteins in same PDB: d1yira2, d1yira3, d1yirb2, d1yirb3, d1yirc2, d1yirc3, d1yird2, d1yird3
    complexed with so4
  2. Domain d1yirb1: 1yir B:145-399 [123332]
    Other proteins in same PDB: d1yira2, d1yira3, d1yirb2, d1yirb3, d1yirc2, d1yirc3, d1yird2, d1yird3
    automated match to d1yira1
    complexed with so4
  3. Domain d1yirc1: 1yir C:145-399 [123334]
    Other proteins in same PDB: d1yira2, d1yira3, d1yirb2, d1yirb3, d1yirc2, d1yirc3, d1yird2, d1yird3
    automated match to d1yira1
    complexed with so4
  4. Domain d1yird1: 1yir D:145-399 [123336]
    Other proteins in same PDB: d1yira2, d1yira3, d1yirb2, d1yirb3, d1yirc2, d1yirc3, d1yird2, d1yird3
    automated match to d1yira1
    complexed with so4

More info for Protein Nicotinate phosphoribosyltransferase, C-terminal domain from c.1.17.2: Nicotinate phosphoribosyltransferase C-terminal domain-like

Timeline for Protein Nicotinate phosphoribosyltransferase, C-terminal domain from c.1.17.2: Nicotinate phosphoribosyltransferase C-terminal domain-like:

Protein Nicotinate phosphoribosyltransferase, C-terminal domain from c.1.17.2: Nicotinate phosphoribosyltransferase C-terminal domain-like first appeared in SCOP 1.69, called Protein Nicotinate phosphoribosyltransferase, C-terminal domain from d.41.2.3: Nicotinate phosphoribosyltransferase, C-terminal domain
Protein Nicotinate phosphoribosyltransferase, C-terminal domain from c.1.17.2: Nicotinate phosphoribosyltransferase C-terminal domain-like was called Protein Nicotinate phosphoribosyltransferase, C-terminal domain from c.1.17.2: Monomeric nicotinate phosphoribosyltransferase C-terminal domain in SCOPe 2.07