Lineage for Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2942376Fold d.32: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase [54592] (1 superfamily)
    beta-alpha-beta(3); 2 layers: alpha/beta
  4. 2942377Superfamily d.32.1: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase [54593] (11 families) (S)
  5. 2942540Family d.32.1.3: Extradiol dioxygenases [54602] (5 proteins)
    duplication: consists of 2 similar domains with 2 repeats in each
    Similar to the Methylmalonyl-CoA epimerase dimer
  6. 2942578Protein 4-hydroxyphenylpyruvate dioxygenase, HppD [54608] (6 species)
  7. 2942610Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [110877] (15 PDB entries)
    Uniprot P93836 33-428 ! Uniprot P93836 63-459

PDB entries in Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]:

  1. Domain(s) for 1sp9:
    1. 2942633Domain d1sp9a1: 1sp9 A:33-232 [238534]
      complexed with fe2
    2. 2942634Domain d1sp9a2: 1sp9 A:233-428 [238535]
      complexed with fe2
    3. 2942635Domain d1sp9b1: 1sp9 B:33-193 [238536]
      automated match to d1tg5a1
      complexed with fe2
    4. 2942636Domain d1sp9b2: 1sp9 B:202-437 [238537]
      automated match to d1tg5a2
      complexed with fe2
  2. Domain(s) for 1sqd:
    1. 2942615Domain d1sqda1: 1sqd A:14-195 [105906]
      complexed with fe
    2. 2942616Domain d1sqda2: 1sqd A:196-410 [105907]
      complexed with fe
  3. Domain(s) for 1tfz:
    1. 2942617Domain d1tfza1: 1tfz A:15-195 [106886]
      complexed with 869, fe
    2. 2942618Domain d1tfza2: 1tfz A:196-408 [106887]
      complexed with 869, fe
  4. Domain(s) for 1tg5:
    1. 2942619Domain d1tg5a1: 1tg5 A:14-195 [106890]
      complexed with 645, fe2
    2. 2942620Domain d1tg5a2: 1tg5 A:196-410 [106891]
      complexed with 645, fe2
  5. Domain(s) for 5xgk:
    1. 2942649Domain d5xgka1: 5xgk A:29-232 [357805]
      automated match to d1sp9a1
      complexed with act, fe, tyf
    2. 2942650Domain d5xgka2: 5xgk A:233-437 [357806]
      automated match to d1sp9a2
      complexed with act, fe, tyf
    3. 2942651Domain d5xgkb1: 5xgk B:30-232 [357824]
      automated match to d1sp9a1
      complexed with act, fe, tyf
    4. 2942652Domain d5xgkb2: 5xgk B:233-434 [357825]
      automated match to d1sp9a2
      complexed with act, fe, tyf
    5. 2942653Domain d5xgkc1: 5xgk C:30-232 [357820]
      automated match to d1sp9a1
      complexed with act, fe, tyf
    6. 2942654Domain d5xgkc2: 5xgk C:233-439 [357821]
      automated match to d1sp9a2
      complexed with act, fe, tyf
    7. 2942655Domain d5xgkd1: 5xgk D:30-232 [357807]
      automated match to d1sp9a1
      complexed with act, fe, tyf
    8. 2942656Domain d5xgkd2: 5xgk D:233-436 [357808]
      automated match to d1sp9a2
      complexed with act, fe, tyf
  6. Domain(s) for 5ywg:
    1. 2942629Domain d5ywga1: 5ywg A:29-232 [362509]
      automated match to d1sp9a1
      complexed with 92l, co
    2. 2942630Domain d5ywga2: 5ywg A:233-434 [362510]
      automated match to d1sp9a2
      complexed with 92l, co
    3. 2942631Domain d5ywgb1: 5ywg B:29-232 [362582]
      automated match to d1sp9a1
      complexed with 92l, co
    4. 2942632Domain d5ywgb2: 5ywg B:233-434 [362583]
      automated match to d1sp9a2
      complexed with 92l, co
  7. Domain(s) for 5ywh:
    1. 2942645Domain d5ywha1: 5ywh A:29-232 [362601]
      automated match to d1sp9a1
      complexed with 92u, fe
    2. 2942646Domain d5ywha2: 5ywh A:233-434 [362602]
      automated match to d1sp9a2
      complexed with 92u, fe
    3. 2942647Domain d5ywhb1: 5ywh B:29-232 [362537]
      automated match to d1sp9a1
      complexed with 92u, fe
    4. 2942648Domain d5ywhb2: 5ywh B:233-434 [362538]
      automated match to d1sp9a2
      complexed with 92u, fe
  8. Domain(s) for 5ywi:
    1. 2942627Domain d5ywia1: 5ywi A:36-232 [362502]
      automated match to d5dhwa1
      complexed with co, ntd; mutant
    2. 2942628Domain d5ywia2: 5ywi A:233-431 [362503]
      automated match to d5dhwa2
      complexed with co, ntd; mutant
  9. Domain(s) for 5ywk:
    1. 2942657Domain d5ywka1: 5ywk A:29-232 [362580]
      automated match to d1sp9a1
      complexed with 92x, co
    2. 2942658Domain d5ywka2: 5ywk A:233-434 [362581]
      automated match to d1sp9a2
      complexed with 92x, co
    3. 2942659Domain d5ywkb1: 5ywk B:29-232 [362607]
      automated match to d1sp9a1
      complexed with 92x, co
    4. 2942660Domain d5ywkb2: 5ywk B:233-434 [362608]
      automated match to d1sp9a2
      complexed with 92x, co
  10. Domain(s) for 5yy6:
    1. 2942621Domain d5yy6a1: 5yy6 A:35-232 [362545]
      automated match to d5dhwa1
      complexed with 94l, co; mutant
    2. 2942622Domain d5yy6a2: 5yy6 A:233-432 [362546]
      automated match to d5dhwa2
      complexed with 94l, co; mutant
  11. Domain(s) for 6isd:
    1. 2942623Domain d6isda1: 6isd A:30-232 [360696]
      automated match to d1sp9a1
      complexed with 5bq, co
    2. 2942624Domain d6isda2: 6isd A:233-434 [360697]
      automated match to d1sp9a2
      complexed with 5bq, co
    3. 2942625Domain d6isdb1: 6isd B:30-232 [360691]
      automated match to d1sp9a1
      complexed with 5bq, co
    4. 2942626Domain d6isdb2: 6isd B:233-436 [360692]
      automated match to d1sp9a2
      complexed with 5bq, co
  12. Domain(s) for 6j63:
    1. 2942637Domain d6j63a1: 6j63 A:30-232 [364649]
      automated match to d1sp9a1
      complexed with fe, ntd
    2. 2942638Domain d6j63a2: 6j63 A:233-434 [364650]
      automated match to d1sp9a2
      complexed with fe, ntd
    3. 2942639Domain d6j63b1: 6j63 B:30-232 [364593]
      automated match to d1sp9a1
      complexed with fe, ntd
    4. 2942640Domain d6j63b2: 6j63 B:233-434 [364594]
      automated match to d1sp9a2
      complexed with fe, ntd
    5. 2942641Domain d6j63c1: 6j63 C:30-232 [364571]
      automated match to d1sp9a1
      complexed with fe, ntd
    6. 2942642Domain d6j63c2: 6j63 C:233-434 [364572]
      automated match to d1sp9a2
      complexed with fe, ntd
    7. 2942643Domain d6j63d1: 6j63 D:30-232 [364575]
      automated match to d1sp9a1
      complexed with fe, ntd
    8. 2942644Domain d6j63d2: 6j63 D:233-434 [364576]
      automated match to d1sp9a2
      complexed with fe, ntd
  13. Domain(s) for 6jx9:
    1. 2942613Domain d6jx9a1: 6jx9 A:35-232 [382070]
      automated match to d1sp9a1
      complexed with co, cqc
    2. 2942614Domain d6jx9a2: 6jx9 A:233-436 [382071]
      automated match to d1sp9a2
      complexed with co, cqc
  14. Domain(s) for 6lgt:
    1. 2942611Domain d6lgta1: 6lgt A:35-232 [390888]
      automated match to d1sp9a1
      complexed with co, ed3, mpd
    2. 2942612Domain d6lgta2: 6lgt A:233-437 [390889]
      automated match to d1sp9a2
      complexed with co, ed3, mpd
  15. Domain(s) for 7e0x:
    1. 3085097Domain d7e0xa1: 7e0x A:35-232 [421414]
      automated match to d5ywga1
      complexed with 4hp, co
    2. 3085098Domain d7e0xa2: 7e0x A:233-439 [421415]
      automated match to d6lgta2
      complexed with 4hp, co

More info for Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from d.32.1.3 4-hydroxyphenylpyruvate dioxygenase, HppD

Timeline for Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from d.32.1.3 4-hydroxyphenylpyruvate dioxygenase, HppD: