SCOPe 2.08: Protein: AMP nucleosidase

Lineage for Protein: AMP nucleosidase

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.56: Phosphorylase/hydrolase-like [53162] (8 superfamilies)
core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops

Superfamily c.56.2: Purine and uridine phosphorylases [53167] (2 families)

complex architecture; contains mixed beta-sheet of 8 strands, order 23415867, strands 3, 6 & 7 are antiparallel to the rest; and barrel, closed; n=5, S=8

Family c.56.2.1: Purine and uridine phosphorylases [53168] (7 proteins)
Protein AMP nucleosidase [110645] (2 species)
contains extra N-terminal oligomerisation (sub)domain (8-153)

Species:

Bacteroides thetaiotaomicron [TaxId:818] [117658] (1 PDB entry)
Uniprot Q7MVU1
- Domains for 1ybf:
  1. Domain d1ybfa_: 1ybf A: [116609]
    Structural genomics target
  2. Domain d1ybfb_: 1ybf B: [116610]
    Structural genomics target
  3. Domain d1ybfc_: 1ybf C: [116611]
    Structural genomics target
Escherichia coli [TaxId:562] [110646] (4 PDB entries)
Uniprot P15272
1. Domains for 1t8r:
  1. Domain d1t8ra_: 1t8r A: [106673]
    has additional subdomain(s) that are not in the common domain
  2. Domain d1t8rb_: 1t8r B: [106674]
    has additional subdomain(s) that are not in the common domain
  3. Domain d1t8rc_: 1t8r C: [106675]
    has additional subdomain(s) that are not in the common domain
  4. Domain d1t8rd_: 1t8r D: [106676]
    has additional subdomain(s) that are not in the common domain
  5. Domain d1t8re_: 1t8r E: [106677]
    has additional subdomain(s) that are not in the common domain
  6. Domain d1t8rf_: 1t8r F: [106678]
    has additional subdomain(s) that are not in the common domain
2. Domains for 1t8s:
  1. Domain d1t8sa_: 1t8s A: [106679]
    complexed with fmp
    has additional subdomain(s) that are not in the common domain
  2. Domain d1t8sb_: 1t8s B: [106680]
    complexed with fmp
    has additional subdomain(s) that are not in the common domain
  3. Domain d1t8sc_: 1t8s C: [106681]
    complexed with fmp
    has additional subdomain(s) that are not in the common domain
  4. Domain d1t8sd_: 1t8s D: [106682]
    complexed with fmp
    has additional subdomain(s) that are not in the common domain
  5. Domain d1t8se_: 1t8s E: [106683]
    complexed with fmp
    has additional subdomain(s) that are not in the common domain
  6. Domain d1t8sf_: 1t8s F: [106684]
    complexed with fmp
    has additional subdomain(s) that are not in the common domain
3. Domains for 1t8w:
  1. Domain d1t8wa_: 1t8w A: [106689]
    has additional subdomain(s) that are not in the common domain
  2. Domain d1t8wb_: 1t8w B: [106690]
    has additional subdomain(s) that are not in the common domain
  3. Domain d1t8wc_: 1t8w C: [106691]
    has additional subdomain(s) that are not in the common domain
  4. Domain d1t8wd_: 1t8w D: [106692]
    has additional subdomain(s) that are not in the common domain
  5. Domain d1t8we_: 1t8w E: [106693]
    has additional subdomain(s) that are not in the common domain
  6. Domain d1t8wf_: 1t8w F: [106694]
    has additional subdomain(s) that are not in the common domain
4. Domains for 1t8y:
  1. Domain d1t8ya_: 1t8y A: [106695]
    complexed with po4
    has additional subdomain(s) that are not in the common domain
  2. Domain d1t8yb_: 1t8y B: [106696]
    complexed with po4
    has additional subdomain(s) that are not in the common domain
  3. Domain d1t8yc_: 1t8y C: [106697]
    complexed with po4
    has additional subdomain(s) that are not in the common domain
  4. Domain d1t8yd_: 1t8y D: [106698]
    complexed with po4
    has additional subdomain(s) that are not in the common domain
  5. Domain d1t8ye_: 1t8y E: [106699]
    complexed with po4
    has additional subdomain(s) that are not in the common domain
  6. Domain d1t8yf_: 1t8y F: [106700]
    complexed with po4
    has additional subdomain(s) that are not in the common domain

More info for Protein AMP nucleosidase from c.56.2.1: Purine and uridine phosphorylases

Timeline for Protein AMP nucleosidase from c.56.2.1: Purine and uridine phosphorylases:

Protein AMP nucleosidase from c.56.2.1: Purine and uridine phosphorylases first appeared in SCOP 1.69
Protein AMP nucleosidase from c.56.2.1: Purine and uridine phosphorylases appears in SCOPe 2.07