SCOP 1.69: Species: Pseudomonas fragi

Lineage for Species: Pseudomonas fragi

Root: SCOP 1.69
Class c: Alpha and beta proteins (a/b) [51349] (136 folds)

Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
The nucleotide-binding modes of this and the next two folds/superfamilies are similar

Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (12 families)

Family c.2.1.6: 6-phosphogluconate dehydrogenase-like, N-terminal domain [51868] (14 proteins)
the beta-sheet is extended to 8 strands, order 32145678; strands 7 & 8 are antiparallel to the rest
C-terminal domains also show some similarity

Protein Fatty oxidation complex alpha subunit, middle domain [110432] (1 species)
Species Pseudomonas fragi [TaxId:296] [110433] (3 PDB entries)

PDB entries in Species: Pseudomonas fragi:

Domain(s) for 1wdk:
1. Domain d1wdka3: 1wdk A:311-496 [109252]
  Other proteins in same PDB: d1wdka1, d1wdka2, d1wdka4, d1wdkb1, d1wdkb2, d1wdkb4, d1wdkc1, d1wdkc2, d1wdkd1, d1wdkd2
2. Domain d1wdkb3: 1wdk B:311-496 [109256]
  Other proteins in same PDB: d1wdka1, d1wdka2, d1wdka4, d1wdkb1, d1wdkb2, d1wdkb4, d1wdkc1, d1wdkc2, d1wdkd1, d1wdkd2
Domain(s) for 1wdl:
1. Domain d1wdla3: 1wdl A:311-496 [109264]
  Other proteins in same PDB: d1wdla1, d1wdla2, d1wdla4, d1wdlb1, d1wdlb2, d1wdlb4, d1wdlc1, d1wdlc2, d1wdld1, d1wdld2
2. Domain d1wdlb3: 1wdl B:311-496 [109268]
  Other proteins in same PDB: d1wdla1, d1wdla2, d1wdla4, d1wdlb1, d1wdlb2, d1wdlb4, d1wdlc1, d1wdlc2, d1wdld1, d1wdld2
Domain(s) for 1wdm:
1. Domain d1wdma3: 1wdm A:311-496 [109276]
  Other proteins in same PDB: d1wdma1, d1wdma2, d1wdma4, d1wdmb1, d1wdmb2, d1wdmb4, d1wdmc1, d1wdmc2, d1wdmd1, d1wdmd2
2. Domain d1wdmb3: 1wdm B:311-496 [109280]
  Other proteins in same PDB: d1wdma1, d1wdma2, d1wdma4, d1wdmb1, d1wdmb2, d1wdmb4, d1wdmc1, d1wdmc2, d1wdmd1, d1wdmd2

More info for Species Pseudomonas fragi [TaxId:296] from c.2.1.6 Fatty oxidation complex alpha subunit, middle domain

Timeline for Species Pseudomonas fragi [TaxId:296] from c.2.1.6 Fatty oxidation complex alpha subunit, middle domain:

Species Pseudomonas fragi [TaxId:296] from c.2.1.6 Fatty oxidation complex alpha subunit, middle domain is new in SCOP 1.69
Species Pseudomonas fragi [TaxId:296] from c.2.1.6 Fatty oxidation complex alpha subunit, middle domain appears in SCOP 1.71
Species Pseudomonas fragi [TaxId:296] from c.2.1.6 Fatty oxidation complex alpha subunit, middle domain appears in the current release, SCOPe 2.08