Lineage for Species: Pseudomonas fragi [TaxId: 296]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2090218Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2090219Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2093531Family c.2.1.6: 6-phosphogluconate dehydrogenase-like, N-terminal domain [51868] (19 protein domains)
    the beta-sheet is extended to 8 strands, order 32145678; strands 7 & 8 are antiparallel to the rest
    C-terminal domains also show some similarity
  6. 2093576Protein Fatty oxidation complex alpha subunit, middle domain [110432] (1 species)
  7. 2093577Species Pseudomonas fragi [TaxId:296] [110433] (4 PDB entries)
    Uniprot P28793

PDB entries in Species: Pseudomonas fragi [TaxId: 296]:

  1. Domain(s) for 1wdk:
    1. 2093578Domain d1wdka3: 1wdk A:311-496 [109252]
      Other proteins in same PDB: d1wdka1, d1wdka2, d1wdka4, d1wdkb1, d1wdkb2, d1wdkb4, d1wdkc1, d1wdkc2, d1wdkd1, d1wdkd2
      complexed with aco, hg, n8e, nad, zn
    2. 2093579Domain d1wdkb3: 1wdk B:311-496 [109256]
      Other proteins in same PDB: d1wdka1, d1wdka2, d1wdka4, d1wdkb1, d1wdkb2, d1wdkb4, d1wdkc1, d1wdkc2, d1wdkd1, d1wdkd2
      complexed with aco, hg, n8e, nad, zn
  2. Domain(s) for 1wdl:
    1. 2093582Domain d1wdla3: 1wdl A:311-496 [109264]
      Other proteins in same PDB: d1wdla1, d1wdla2, d1wdla4, d1wdlb1, d1wdlb2, d1wdlb4, d1wdlc1, d1wdlc2, d1wdld1, d1wdld2
      complexed with aco, n8e, nad
    2. 2093583Domain d1wdlb3: 1wdl B:311-496 [109268]
      Other proteins in same PDB: d1wdla1, d1wdla2, d1wdla4, d1wdlb1, d1wdlb2, d1wdlb4, d1wdlc1, d1wdlc2, d1wdld1, d1wdld2
      complexed with aco, n8e, nad
  3. Domain(s) for 1wdm:
    1. 2093584Domain d1wdma3: 1wdm A:311-496 [109276]
      Other proteins in same PDB: d1wdma1, d1wdma2, d1wdma4, d1wdmb1, d1wdmb2, d1wdmb4, d1wdmc1, d1wdmc2, d1wdmd1, d1wdmd2
      complexed with aco, nad, zn
    2. 2093585Domain d1wdmb3: 1wdm B:311-496 [109280]
      Other proteins in same PDB: d1wdma1, d1wdma2, d1wdma4, d1wdmb1, d1wdmb2, d1wdmb4, d1wdmc1, d1wdmc2, d1wdmd1, d1wdmd2
      complexed with aco, nad, zn
  4. Domain(s) for 2d3t:
    1. 2093580Domain d2d3ta3: 2d3t A:311-496 [131222]
      Other proteins in same PDB: d2d3ta1, d2d3ta2, d2d3ta4, d2d3tb1, d2d3tb2, d2d3tb4, d2d3tc1, d2d3tc2, d2d3td1, d2d3td2
      complexed with aco, nad
    2. 2093581Domain d2d3tb3: 2d3t B:311-496 [131226]
      Other proteins in same PDB: d2d3ta1, d2d3ta2, d2d3ta4, d2d3tb1, d2d3tb2, d2d3tb4, d2d3tc1, d2d3tc2, d2d3td1, d2d3td2
      complexed with aco, nad

More info for Species Pseudomonas fragi [TaxId:296] from c.2.1.6 Fatty oxidation complex alpha subunit, middle domain

Timeline for Species Pseudomonas fragi [TaxId:296] from c.2.1.6 Fatty oxidation complex alpha subunit, middle domain: