Lineage for Species: Clostridium acetobutylicum [TaxId: 1488]

  1. Root: SCOPe 2.08
  2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. Family c.2.1.2: Tyrosine-dependent oxidoreductases [51751] (73 proteins)
    also known as short-chain dehydrogenases and SDR family
    parallel beta-sheet is extended by 7th strand, order 3214567; left-handed crossover connection between strands 6 and 7

    has additional subdomain(s) that are not in the common domain
  6. Protein DTDP-4-dehydrorhamnose reductase RfbD [110409] (1 species)
  7. Species Clostridium acetobutylicum [TaxId:1488] [110410] (1 PDB entry)
    Uniprot Q97GQ1

PDB entry in Species: Clostridium acetobutylicum [TaxId: 1488]:

  • Domain(s) for 1vl0:
    1. Domain d1vl0a1: 1vl0 A:1-280 [108704]
      Other proteins in same PDB: d1vl0a2, d1vl0c2
      Structural genomics target
      complexed with nai, unl

      has additional subdomain(s) that are not in the common domain
    2. Domain d1vl0b_: 1vl0 B: [108705]
      Other proteins in same PDB: d1vl0a2, d1vl0c2
      Structural genomics target
      complexed with nai, unl

      has additional subdomain(s) that are not in the common domain
    3. Domain d1vl0c1: 1vl0 C:1-280 [108706]
      Other proteins in same PDB: d1vl0a2, d1vl0c2
      Structural genomics target
      complexed with nai, unl

      has additional subdomain(s) that are not in the common domain

More info for Species Clostridium acetobutylicum [TaxId:1488] from c.2.1.2 DTDP-4-dehydrorhamnose reductase RfbD

Timeline for Species Clostridium acetobutylicum [TaxId:1488] from c.2.1.2 DTDP-4-dehydrorhamnose reductase RfbD: