SCOPe 2.08: Species: Amycolatopsis sp. [TaxId: 37632]

Lineage for Species: Amycolatopsis sp. [TaxId: 37632]

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.11: Enolase C-terminal domain-like [51604] (3 families)

(S)

binds metal ion (magnesium or manganese) in conserved site inside barrel
N-terminal alpha+beta domain is common to this superfamily

Family c.1.11.2: D-glucarate dehydratase-like [51609] (15 proteins)
Protein N-acylamino acid racemase [110372] (4 species)
Species Amycolatopsis sp. [TaxId:37632] [110373] (4 PDB entries)
Uniprot Q44244 # similar activity to a remotely related O-succinylbenzoate synthase from E. coli

PDB entries in Species: Amycolatopsis sp. [TaxId: 37632]:

Domain(s) for 1sja:
1. Domain d1sjaa1: 1sja A:126-368 [105608]
  Other proteins in same PDB: d1sjaa2, d1sjab2, d1sjac2, d1sjad2
  complexed with ame, mg
2. Domain d1sjab1: 1sja B:126-368 [105610]
  Other proteins in same PDB: d1sjaa2, d1sjab2, d1sjac2, d1sjad2
  complexed with ame, mg
3. Domain d1sjac1: 1sja C:126-368 [105612]
  Other proteins in same PDB: d1sjaa2, d1sjab2, d1sjac2, d1sjad2
  complexed with ame, mg
4. Domain d1sjad1: 1sja D:126-368 [105614]
  Other proteins in same PDB: d1sjaa2, d1sjab2, d1sjac2, d1sjad2
  complexed with ame, mg
Domain(s) for 1sjb:
1. Domain d1sjba1: 1sjb A:126-367 [105616]
  Other proteins in same PDB: d1sjba2, d1sjbb2, d1sjbc2, d1sjbd2
  complexed with mg, osb
2. Domain d1sjbb1: 1sjb B:126-368 [105618]
  Other proteins in same PDB: d1sjba2, d1sjbb2, d1sjbc2, d1sjbd2
  complexed with mg, osb
3. Domain d1sjbc1: 1sjb C:126-367 [105620]
  Other proteins in same PDB: d1sjba2, d1sjbb2, d1sjbc2, d1sjbd2
  complexed with mg, osb
4. Domain d1sjbd1: 1sjb D:126-368 [105622]
  Other proteins in same PDB: d1sjba2, d1sjbb2, d1sjbc2, d1sjbd2
  complexed with mg, osb
Domain(s) for 1sjc:
1. Domain d1sjca1: 1sjc A:126-367 [105624]
  Other proteins in same PDB: d1sjca2, d1sjcb2, d1sjcc2, d1sjcd2
  complexed with mg, smg
2. Domain d1sjcb1: 1sjc B:126-368 [105626]
  Other proteins in same PDB: d1sjca2, d1sjcb2, d1sjcc2, d1sjcd2
  complexed with mg, smg
3. Domain d1sjcc1: 1sjc C:126-367 [105628]
  Other proteins in same PDB: d1sjca2, d1sjcb2, d1sjcc2, d1sjcd2
  complexed with mg, smg
4. Domain d1sjcd1: 1sjc D:126-368 [105630]
  Other proteins in same PDB: d1sjca2, d1sjcb2, d1sjcc2, d1sjcd2
  complexed with mg, smg
Domain(s) for 1sjd:
1. Domain d1sjda1: 1sjd A:126-367 [105632]
  Other proteins in same PDB: d1sjda2, d1sjdb2, d1sjdc2, d1sjdd2
  complexed with npg
2. Domain d1sjdb1: 1sjd B:126-368 [105634]
  Other proteins in same PDB: d1sjda2, d1sjdb2, d1sjdc2, d1sjdd2
  complexed with npg
3. Domain d1sjdc1: 1sjd C:126-367 [105636]
  Other proteins in same PDB: d1sjda2, d1sjdb2, d1sjdc2, d1sjdd2
  complexed with npg
4. Domain d1sjdd1: 1sjd D:126-367 [105638]
  Other proteins in same PDB: d1sjda2, d1sjdb2, d1sjdc2, d1sjdd2
  complexed with npg

More info for Species Amycolatopsis sp. [TaxId:37632] from c.1.11.2 N-acylamino acid racemase

Timeline for Species Amycolatopsis sp. [TaxId:37632] from c.1.11.2 N-acylamino acid racemase:

Species Amycolatopsis sp. [TaxId:37632] from c.1.11.2 N-acylamino acid racemase first appeared in SCOP 1.69
Species Amycolatopsis sp. [TaxId:37632] from c.1.11.2 N-acylamino acid racemase appears in SCOPe 2.07