Lineage for Protein: N-acylamino acid racemase

  1. Root: SCOP 1.73
  2. 681097Class c: Alpha and beta proteins (a/b) [51349] (141 folds)
  3. 681098Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 684589Superfamily c.1.11: Enolase C-terminal domain-like [51604] (2 families) (S)
    binds metal ion (magnesium or manganese) in conserved site inside barrel
    N-terminal alpha+beta domain is common to this superfamily
  5. 684647Family c.1.11.2: D-glucarate dehydratase-like [51609] (13 proteins)
  6. 684768Protein N-acylamino acid racemase [110372] (4 species)

Species:

  1. 684769Amycolatopsis sp. [TaxId:37632] [110373] (4 PDB entries)
    1. Domains for 1sja:
      1. 684782Domain d1sjaa1: 1sja A:126-368 [105608]
        Other proteins in same PDB: d1sjaa2, d1sjab2, d1sjac2, d1sjad2
      2. 684783Domain d1sjab1: 1sja B:126-368 [105610]
        Other proteins in same PDB: d1sjaa2, d1sjab2, d1sjac2, d1sjad2
      3. 684784Domain d1sjac1: 1sja C:126-368 [105612]
        Other proteins in same PDB: d1sjaa2, d1sjab2, d1sjac2, d1sjad2
      4. 684785Domain d1sjad1: 1sja D:126-368 [105614]
        Other proteins in same PDB: d1sjaa2, d1sjab2, d1sjac2, d1sjad2
        complexed with ame, mg
    2. Domains for 1sjb:
      1. 684778Domain d1sjba1: 1sjb A:126-367 [105616]
        Other proteins in same PDB: d1sjba2, d1sjbb2, d1sjbc2, d1sjbd2
      2. 684779Domain d1sjbb1: 1sjb B:126-368 [105618]
        Other proteins in same PDB: d1sjba2, d1sjbb2, d1sjbc2, d1sjbd2
      3. 684780Domain d1sjbc1: 1sjb C:126-367 [105620]
        Other proteins in same PDB: d1sjba2, d1sjbb2, d1sjbc2, d1sjbd2
      4. 684781Domain d1sjbd1: 1sjb D:126-368 [105622]
        Other proteins in same PDB: d1sjba2, d1sjbb2, d1sjbc2, d1sjbd2
        complexed with mg, osb
    3. Domains for 1sjc:
      1. 684774Domain d1sjca1: 1sjc A:126-367 [105624]
        Other proteins in same PDB: d1sjca2, d1sjcb2, d1sjcc2, d1sjcd2
      2. 684775Domain d1sjcb1: 1sjc B:126-368 [105626]
        Other proteins in same PDB: d1sjca2, d1sjcb2, d1sjcc2, d1sjcd2
      3. 684776Domain d1sjcc1: 1sjc C:126-367 [105628]
        Other proteins in same PDB: d1sjca2, d1sjcb2, d1sjcc2, d1sjcd2
      4. 684777Domain d1sjcd1: 1sjc D:126-368 [105630]
        Other proteins in same PDB: d1sjca2, d1sjcb2, d1sjcc2, d1sjcd2
        complexed with mg, smg
    4. Domains for 1sjd:
      1. 684770Domain d1sjda1: 1sjd A:126-367 [105632]
        Other proteins in same PDB: d1sjda2, d1sjdb2, d1sjdc2, d1sjdd2
      2. 684771Domain d1sjdb1: 1sjd B:126-368 [105634]
        Other proteins in same PDB: d1sjda2, d1sjdb2, d1sjdc2, d1sjdd2
      3. 684772Domain d1sjdc1: 1sjd C:126-367 [105636]
        Other proteins in same PDB: d1sjda2, d1sjdb2, d1sjdc2, d1sjdd2
      4. 684773Domain d1sjdd1: 1sjd D:126-367 [105638]
        Other proteins in same PDB: d1sjda2, d1sjdb2, d1sjdc2, d1sjdd2
        complexed with npg
  2. 684786Deinococcus radiodurans [TaxId:1299] [110374] (4 PDB entries)
    1. Domains for 1r0m:
      1. 684787Domain d1r0ma1: 1r0m A:133-375 [104747]
        Other proteins in same PDB: d1r0ma2, d1r0mb2, d1r0mc2, d1r0md2
      2. 684788Domain d1r0mb1: 1r0m B:133-375 [104749]
        Other proteins in same PDB: d1r0ma2, d1r0mb2, d1r0mc2, d1r0md2
      3. 684789Domain d1r0mc1: 1r0m C:133-375 [104751]
        Other proteins in same PDB: d1r0ma2, d1r0mb2, d1r0mc2, d1r0md2
      4. 684790Domain d1r0md1: 1r0m D:133-375 [104753]
        Other proteins in same PDB: d1r0ma2, d1r0mb2, d1r0mc2, d1r0md2
    2. Domains for 1xpy:
      1. 684792Domain d1xpya1: 1xpy A:133-375 [115810]
        Other proteins in same PDB: d1xpya2, d1xpyb2, d1xpyc2, d1xpyd2
      2. 684793Domain d1xpyb1: 1xpy B:133-375 [115812]
        Other proteins in same PDB: d1xpya2, d1xpyb2, d1xpyc2, d1xpyd2
      3. 684794Domain d1xpyc1: 1xpy C:133-375 [115814]
        Other proteins in same PDB: d1xpya2, d1xpyb2, d1xpyc2, d1xpyd2
      4. 684795Domain d1xpyd1: 1xpy D:133-375 [115816]
        Other proteins in same PDB: d1xpya2, d1xpyb2, d1xpyc2, d1xpyd2
        complexed with mg, nlq
    3. Domains for 1xs2:
      1. 684796Domain d1xs2a1: 1xs2 A:133-375 [115898]
        Other proteins in same PDB: d1xs2a2, d1xs2b2, d1xs2c2, d1xs2d2
      2. 684797Domain d1xs2b1: 1xs2 B:133-375 [115900]
        Other proteins in same PDB: d1xs2a2, d1xs2b2, d1xs2c2, d1xs2d2
      3. 684798Domain d1xs2c1: 1xs2 C:133-375 [115902]
        Other proteins in same PDB: d1xs2a2, d1xs2b2, d1xs2c2, d1xs2d2
      4. 684799Domain d1xs2d1: 1xs2 D:133-375 [115904]
        Other proteins in same PDB: d1xs2a2, d1xs2b2, d1xs2c2, d1xs2d2
        complexed with mg
    4. Domain for 2fkp:
  3. 684800Enterococcus faecalis [TaxId:1351] [117382] (1 PDB entry)
  4. 684803Listeria innocua [TaxId:1642] [117383] (1 PDB entry)

More info for Protein N-acylamino acid racemase from c.1.11.2: D-glucarate dehydratase-like

Timeline for Protein N-acylamino acid racemase from c.1.11.2: D-glucarate dehydratase-like: