Lineage for Protein: 2-keto-3-deoxy gluconate aldolase Eda

  1. Root: SCOPe 2.08
  2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily c.1.10: Aldolase [51569] (9 families) (S)
    Common fold covers whole protein structure
  5. Family c.1.10.1: Class I aldolase [51570] (13 proteins)
    the catalytic lysine forms schiff-base intermediate with substrate
    possible link between the aldolase superfamily and the phosphate-binding beta/alpha barrels
  6. Protein 2-keto-3-deoxy gluconate aldolase Eda [110360] (1 species)

Species:

  • Sulfolobus solfataricus [TaxId:2287] [110361] (5 PDB entries)
    Uniprot Q97U28
    1. Domains for 1w37:
      1. Domain d1w37a_: 1w37 A: [109142]
        complexed with gol, na
        has additional insertions and/or extensions that are not grouped together
      2. Domain d1w37b_: 1w37 B: [109143]
        complexed with gol, na
        has additional insertions and/or extensions that are not grouped together
      3. Domain d1w37c_: 1w37 C: [109144]
        complexed with gol, na
        has additional insertions and/or extensions that are not grouped together
      4. Domain d1w37d_: 1w37 D: [109145]
        complexed with gol, na
        has additional insertions and/or extensions that are not grouped together
    2. Domains for 1w3i:
      1. Domain d1w3ia_: 1w3i A: [109152]
        complexed with gol, pyr
        has additional insertions and/or extensions that are not grouped together
      2. Domain d1w3ib_: 1w3i B: [109153]
        complexed with gol, pyr
        has additional insertions and/or extensions that are not grouped together
      3. Domain d1w3ic_: 1w3i C: [109154]
        complexed with gol, pyr
        has additional insertions and/or extensions that are not grouped together
      4. Domain d1w3id_: 1w3i D: [109155]
        complexed with gol, pyr
        has additional insertions and/or extensions that are not grouped together
    3. Domains for 1w3n:
      1. Domain d1w3na_: 1w3n A: [109160]
        complexed with gol, ssh
        has additional insertions and/or extensions that are not grouped together
      2. Domain d1w3nb_: 1w3n B: [109161]
        complexed with gol, ssh
        has additional insertions and/or extensions that are not grouped together
      3. Domain d1w3nc_: 1w3n C: [109162]
        complexed with gol, ssh
        has additional insertions and/or extensions that are not grouped together
      4. Domain d1w3nd_: 1w3n D: [109163]
        complexed with gol, ssh
        has additional insertions and/or extensions that are not grouped together
    4. Domains for 1w3t:
      1. Domain d1w3ta_: 1w3t A: [109164]
        complexed with 3gr, gol, pyr, rsh
        has additional insertions and/or extensions that are not grouped together
      2. Domain d1w3tb_: 1w3t B: [109165]
        complexed with 3gr, gol, pyr, rsh
        has additional insertions and/or extensions that are not grouped together
      3. Domain d1w3tc_: 1w3t C: [109166]
        complexed with 3gr, gol, pyr, rsh
        has additional insertions and/or extensions that are not grouped together
      4. Domain d1w3td_: 1w3t D: [109167]
        complexed with 3gr, gol, pyr, rsh
        has additional insertions and/or extensions that are not grouped together
    5. Domains for 6g3z:
      1. Domain d6g3za_: 6g3z A: [353922]
        automated match to d1w3ta_
        complexed with ele, ipa

        has additional insertions and/or extensions that are not grouped together
      2. Domain d6g3zb_: 6g3z B: [353935]
        automated match to d1w3ta_
        complexed with ele, ipa

        has additional insertions and/or extensions that are not grouped together

More info for Protein 2-keto-3-deoxy gluconate aldolase Eda from c.1.10.1: Class I aldolase

Timeline for Protein 2-keto-3-deoxy gluconate aldolase Eda from c.1.10.1: Class I aldolase: