Lineage for Species: Buffalo (Bubalus bubalis) [TaxId: 89462]
- Root: SCOPe 2.08
- Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
- Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites - Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)
- Family c.1.8.5: Type II chitinase [51534] (15 proteins)
glycosylase family 18 - Protein Signal processing protein (SPC-40, MGP-40) [89480] (5 species)
secreted during involution - Species Buffalo (Bubalus bubalis) [TaxId:89462] [110353] (9 PDB entries)
Uniprot Q7YS85
PDB entries in Species: Buffalo (Bubalus bubalis) [TaxId: 89462]:
- Domain(s) for 1sv8:
- Domain d1sv8a3: 1sv8 A:1-240,A:309-362 [303076]
Other proteins in same PDB: d1sv8a4
automated match to d1tfva1
- Domain d1sv8a3: 1sv8 A:1-240,A:309-362 [303076]
- Domain(s) for 1tfv:
- Domain d1tfva1: 1tfv A:1-239,A:308-361 [106860]
Other proteins in same PDB: d1tfva2
- Domain d1tfva1: 1tfv A:1-239,A:308-361 [106860]
- Domain(s) for 2o9o:
- Domain d2o9oa1: 2o9o A:1-240,A:309-362 [148686]
Other proteins in same PDB: d2o9oa2
automated match to d1tfva1
- Domain d2o9oa1: 2o9o A:1-240,A:309-362 [148686]
- Domain(s) for 2qf8:
- Domain d2qf8a1: 2qf8 A:1-240,A:309-362 [150731]
Other proteins in same PDB: d2qf8a2
automated match to d1tfva1
complexed with nag
- Domain d2qf8a1: 2qf8 A:1-240,A:309-362 [150731]
- Domain(s) for 4mav:
- Domain d4mava1: 4mav A:1-240,A:309-362 [227905]
Other proteins in same PDB: d4mava2
automated match to d2o9oa1
complexed with gol, nag, rib
- Domain d4mava1: 4mav A:1-240,A:309-362 [227905]
- Domain(s) for 4ml4:
- Domain d4ml4a1: 4ml4 A:1-240,A:309-362 [391116]
Other proteins in same PDB: d4ml4a2
automated match to d1tfva1
complexed with nag, pye
- Domain d4ml4a1: 4ml4 A:1-240,A:309-362 [391116]
- Domain(s) for 4mpk:
- Domain d4mpka1: 4mpk A:1-240,A:309-362 [228812]
Other proteins in same PDB: d4mpka2
automated match to d2o9oa1
complexed with gol, nag
- Domain d4mpka1: 4mpk A:1-240,A:309-362 [228812]
- Domain(s) for 4mtv:
- Domain d4mtva1: 4mtv A:1-240,A:309-362 [228416]
Other proteins in same PDB: d4mtva2
automated match to d2o9oa1
complexed with nag
- Domain d4mtva1: 4mtv A:1-240,A:309-362 [228416]
- Domain(s) for 4q7n:
- Domain d4q7na1: 4q7n A:1-240,A:309-362 [257629]
Other proteins in same PDB: d4q7na2
automated match to d1tfva1
complexed with 2zo, nag
- Domain d4q7na1: 4q7n A:1-240,A:309-362 [257629]
More info for Species Buffalo (Bubalus bubalis) [TaxId:89462] from c.1.8.5 Signal processing protein (SPC-40, MGP-40)
Timeline for Species Buffalo (Bubalus bubalis) [TaxId:89462] from c.1.8.5 Signal processing protein (SPC-40, MGP-40):
- Species Buffalo (Bubalus bubalis) [TaxId:89462] from c.1.8.5 Signal processing protein (SPC-40, MGP-40) first appeared in SCOP 1.69
- Species Buffalo (Bubalus bubalis) [TaxId:89462] from c.1.8.5 Signal processing protein (SPC-40, MGP-40) appears in SCOPe 2.07