Lineage for Protein: 5-keto-4-deoxyuronate isomerase KduI

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2070014Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
    one turn of helix is made by two pairs of antiparallel strands linked with short turns
    has appearance of a sandwich of distinct architecture and jelly-roll topology
  4. 2070015Superfamily b.82.1: RmlC-like cupins [51182] (25 families) (S)
  5. 2070417Family b.82.1.13: KduI-like [110318] (1 protein)
    Pfam PF04962: duplication: consists of two germin-like domains
  6. 2070418Protein 5-keto-4-deoxyuronate isomerase KduI [110319] (2 species)

Species:

  1. 2070419Enterococcus faecalis [TaxId:1351] [141602] (1 PDB entry)
    Uniprot Q838L9 1-260
  2. 2070426Escherichia coli [TaxId:562] [110320] (2 PDB entries)
    Uniprot Q46938 1-266
    1. Domains for 1x8m:
      1. 2070429Domain d1x8ma1: 1x8m A:1004-1268 [109516]
        Other proteins in same PDB: d1x8ma2, d1x8mb2, d1x8mc2, d1x8md2, d1x8me2, d1x8mf2
      2. 2070430Domain d1x8mb1: 1x8m B:2004-2268 [109517]
        Other proteins in same PDB: d1x8ma2, d1x8mb2, d1x8mc2, d1x8md2, d1x8me2, d1x8mf2
      3. 2070431Domain d1x8mc1: 1x8m C:3004-3268 [109518]
        Other proteins in same PDB: d1x8ma2, d1x8mb2, d1x8mc2, d1x8md2, d1x8me2, d1x8mf2
      4. 2070432Domain d1x8md1: 1x8m D:4004-4268 [109519]
        Other proteins in same PDB: d1x8ma2, d1x8mb2, d1x8mc2, d1x8md2, d1x8me2, d1x8mf2
      5. 2070433Domain d1x8me1: 1x8m E:5004-5268 [109520]
        Other proteins in same PDB: d1x8ma2, d1x8mb2, d1x8mc2, d1x8md2, d1x8me2, d1x8mf2
      6. 2070434Domain d1x8mf1: 1x8m F:6004-6268 [109521]
        Other proteins in same PDB: d1x8ma2, d1x8mb2, d1x8mc2, d1x8md2, d1x8me2, d1x8mf2
    2. Domains for 1xru:
      1. 2070427Domain d1xrua1: 1xru A:1-277 [122262]
        Other proteins in same PDB: d1xrua2, d1xrub3
        complexed with 1pe, zn
      2. 2070428Domain d1xrub2: 1xru B:1-278 [122263]
        Other proteins in same PDB: d1xrua2, d1xrub3
        automated match to d1x8ma_
        complexed with 1pe, zn

More info for Protein 5-keto-4-deoxyuronate isomerase KduI from b.82.1.13: KduI-like

Timeline for Protein 5-keto-4-deoxyuronate isomerase KduI from b.82.1.13: KduI-like: