SCOPe 2.08: Protein: 5-keto-4-deoxyuronate isomerase KduI

Lineage for Protein: 5-keto-4-deoxyuronate isomerase KduI

Root: SCOPe 2.08
Class b: All beta proteins [48724] (180 folds)

Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
one turn of helix is made by two pairs of antiparallel strands linked with short turns
has appearance of a sandwich of distinct architecture and jelly-roll topology

Superfamily b.82.1: RmlC-like cupins [51182] (25 families)
Family b.82.1.13: KduI-like [110318] (1 protein)
Pfam PF04962: duplication: consists of two germin-like domains
Protein 5-keto-4-deoxyuronate isomerase KduI [110319] (2 species)

Species:

Enterococcus faecalis [TaxId:1351] [141602] (1 PDB entry)
Uniprot Q838L9 1-260
- Domains for 1ywk:
  1. Domain d1ywka1: 1ywk A:1001-1260 [124155]
    Other proteins in same PDB: d1ywka2, d1ywkb3, d1ywkc3, d1ywkd3, d1ywke3, d1ywkf3
  2. Domain d1ywkb2: 1ywk B:1001-1260 [124156]
    Other proteins in same PDB: d1ywka2, d1ywkb3, d1ywkc3, d1ywkd3, d1ywke3, d1ywkf3
    automated match to d1ywka1
  3. Domain d1ywkc2: 1ywk C:1001-1259 [124157]
    Other proteins in same PDB: d1ywka2, d1ywkb3, d1ywkc3, d1ywkd3, d1ywke3, d1ywkf3
    automated match to d1ywka1
  4. Domain d1ywkd2: 1ywk D:1001-1260 [124158]
    Other proteins in same PDB: d1ywka2, d1ywkb3, d1ywkc3, d1ywkd3, d1ywke3, d1ywkf3
    automated match to d1ywka1
  5. Domain d1ywke2: 1ywk E:1001-1260 [124159]
    Other proteins in same PDB: d1ywka2, d1ywkb3, d1ywkc3, d1ywkd3, d1ywke3, d1ywkf3
    automated match to d1ywka1
  6. Domain d1ywkf2: 1ywk F:1001-1260 [124160]
    Other proteins in same PDB: d1ywka2, d1ywkb3, d1ywkc3, d1ywkd3, d1ywke3, d1ywkf3
    automated match to d1ywka1
Escherichia coli [TaxId:562] [110320] (2 PDB entries)
Uniprot Q46938 1-266
1. Domains for 1x8m:
  1. Domain d1x8ma1: 1x8m A:1004-1268 [109516]
    Other proteins in same PDB: d1x8ma2, d1x8mb2, d1x8mc2, d1x8md2, d1x8me2, d1x8mf2
  2. Domain d1x8mb1: 1x8m B:2004-2268 [109517]
    Other proteins in same PDB: d1x8ma2, d1x8mb2, d1x8mc2, d1x8md2, d1x8me2, d1x8mf2
  3. Domain d1x8mc1: 1x8m C:3004-3268 [109518]
    Other proteins in same PDB: d1x8ma2, d1x8mb2, d1x8mc2, d1x8md2, d1x8me2, d1x8mf2
  4. Domain d1x8md1: 1x8m D:4004-4268 [109519]
    Other proteins in same PDB: d1x8ma2, d1x8mb2, d1x8mc2, d1x8md2, d1x8me2, d1x8mf2
  5. Domain d1x8me1: 1x8m E:5004-5268 [109520]
    Other proteins in same PDB: d1x8ma2, d1x8mb2, d1x8mc2, d1x8md2, d1x8me2, d1x8mf2
  6. Domain d1x8mf1: 1x8m F:6004-6268 [109521]
    Other proteins in same PDB: d1x8ma2, d1x8mb2, d1x8mc2, d1x8md2, d1x8me2, d1x8mf2
2. Domains for 1xru:
  1. Domain d1xrua1: 1xru A:1-277 [122262]
    Other proteins in same PDB: d1xrua2, d1xrub3
    complexed with 1pe, zn
  2. Domain d1xrub2: 1xru B:1-278 [122263]
    Other proteins in same PDB: d1xrua2, d1xrub3
    automated match to d1x8ma_
    complexed with 1pe, zn

More info for Protein 5-keto-4-deoxyuronate isomerase KduI from b.82.1.13: KduI-like

Timeline for Protein 5-keto-4-deoxyuronate isomerase KduI from b.82.1.13: KduI-like:

Protein 5-keto-4-deoxyuronate isomerase KduI from b.82.1.13: KduI-like first appeared in SCOP 1.69, called Protein 5-keto-4-deoxyuronate isomerase KduI from b.82.1.13: KduI-like (Pfam 04962)
Protein 5-keto-4-deoxyuronate isomerase KduI from b.82.1.13: KduI-like appears in SCOPe 2.07