Lineage for Protein: Nucleocapsid protein

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2077861Fold b.148: Coronavirus RNA-binding domain [110303] (1 superfamily)
    coiled antiparallel beta-sheet of 5 strands, order 51324; complex topology, crossing loops
  4. 2077862Superfamily b.148.1: Coronavirus RNA-binding domain [110304] (1 family) (S)
    automatically mapped to Pfam PF00937
  5. 2077863Family b.148.1.1: Coronavirus RNA-binding domain [110305] (1 protein)
    N-terminal part of Pfam PF00937
  6. 2077864Protein Nucleocapsid protein [110306] (2 species)

Species:

  1. 2077865Avian infectious bronchitis virus [TaxId:11120] [141560] (4 PDB entries)
    Uniprot P32923 23-160! Uniprot P69596 29-160! Uniprot P69597 29-160
    different strains
    1. Domains for 2btl:
      1. 2077870Domain d2btla1: 2btl A:29-160 [129154]
      2. 2077871Domain d2btlb_: 2btl B: [129155]
        automated match to d2btla1
    2. Domains for 2bxx:
      1. 2077868Domain d2bxxa1: 2bxx A:29-160 [129446]
      2. 2077869Domain d2bxxb_: 2bxx B: [129447]
        automated match to d2bxxa1
    3. Domains for 2c86:
      1. 2077872Domain d2c86a_: 2c86 A: [130093]
        automated match to d2bxxb_
      2. 2077873Domain d2c86b_: 2c86 B: [130094]
        automated match to d2bxxb_
    4. Domains for 2gec:
      1. 2077866Domain d2geca1: 2gec A:23-160 [135059]
      2. 2077867Domain d2gecb_: 2gec B: [135060]
        automated match to d2geca1
  2. 2077874SARS coronavirus, (SARS-CoV) [TaxId:227859] [110307] (1 PDB entry)
    Uniprot P59595 45-181

More info for Protein Nucleocapsid protein from b.148.1.1: Coronavirus RNA-binding domain

Timeline for Protein Nucleocapsid protein from b.148.1.1: Coronavirus RNA-binding domain: