Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2376890Fold b.34: SH3-like barrel [50036] (21 superfamilies)
    barrel, partly opened; n*=4, S*=8; meander
    the last strand is interrupted by a turn of 3-10 helix
  4. 2378441Superfamily b.34.9: Tudor/PWWP/MBT [63748] (5 families) (S)
  5. 2378442Family b.34.9.1: Tudor domain [63749] (8 proteins)
    Pfam PF00567
  6. 2378476Protein p53-binding protein 1, 53BP1 [110163] (1 species)
    duplication; contains two Tudor domains in tandem
  7. 2378477Species Human (Homo sapiens) [TaxId:9606] [110164] (18 PDB entries)
    Uniprot Q12888 1485-1602 ! Uniprot Q12888 1484-1606

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 1ssf:
    1. 2378510Domain d1ssfa1: 1ssf A:7-60 [105982]
    2. 2378511Domain d1ssfa2: 1ssf A:61-129 [105983]
  2. Domain(s) for 1xni:
    1. 2378486Domain d1xnia1: 1xni A:1485-1537 [115582]
    2. 2378487Domain d1xnia2: 1xni A:1538-1602 [115583]
    3. 2378488Domain d1xnib1: 1xni B:1485-1537 [115584]
    4. 2378489Domain d1xnib2: 1xni B:1538-1602 [115585]
    5. 2378490Domain d1xnic1: 1xni C:1485-1537 [115586]
    6. 2378491Domain d1xnic2: 1xni C:1538-1602 [115587]
    7. 2378492Domain d1xnid1: 1xni D:1485-1537 [115588]
    8. 2378493Domain d1xnid2: 1xni D:1538-1602 [115589]
    9. 2378494Domain d1xnie1: 1xni E:1485-1537 [115590]
    10. 2378495Domain d1xnie2: 1xni E:1538-1602 [115591]
    11. 2378496Domain d1xnif1: 1xni F:1485-1537 [115592]
    12. 2378497Domain d1xnif2: 1xni F:1538-1602 [115593]
    13. 2378498Domain d1xnig1: 1xni G:1485-1537 [115594]
    14. 2378499Domain d1xnig2: 1xni G:1538-1602 [115595]
    15. 2378500Domain d1xnih1: 1xni H:1485-1537 [115596]
    16. 2378501Domain d1xnih2: 1xni H:1538-1602 [115597]
    17. 2378502Domain d1xnii1: 1xni I:1485-1537 [115598]
    18. 2378503Domain d1xnii2: 1xni I:1538-1602 [115599]
    19. 2378504Domain d1xnij1: 1xni J:1485-1537 [115600]
    20. 2378505Domain d1xnij2: 1xni J:1538-1602 [115601]
  3. Domain(s) for 2g3r:
    1. 2378478Domain d2g3ra1: 2g3r A:1485-1537 [134570]
      automated match to d1ssfa1
      complexed with so4
    2. 2378479Domain d2g3ra2: 2g3r A:1538-1603 [134571]
      automated match to d1ssfa2
      complexed with so4
  4. Domain(s) for 2ig0:
    1. 2378480Domain d2ig0a1: 2ig0 A:1485-1537 [137350]
      automated match to d1ssfa1
      protein/DNA complex; complexed with so4
    2. 2378481Domain d2ig0a2: 2ig0 A:1538-1603 [137351]
      automated match to d1ssfa2
      protein/DNA complex; complexed with so4
  5. Domain(s) for 2lvm:
    1. 2378508Domain d2lvma1: 2lvm A:1484-1537 [243008]
      Other proteins in same PDB: d2lvma3
      automated match to d1ssfa1
    2. 2378509Domain d2lvma2: 2lvm A:1538-1603 [243009]
      Other proteins in same PDB: d2lvma3
      automated match to d1ssfa2
  6. Domain(s) for 4rg2:
    1. 2378482Domain d4rg2a1: 4rg2 A:1485-1537 [260428]
      Other proteins in same PDB: d4rg2b3
      automated match to d1ssfa1
      complexed with 3oo, edo, unx
    2. 2378483Domain d4rg2a2: 4rg2 A:1538-1603 [260429]
      Other proteins in same PDB: d4rg2b3
      automated match to d1ssfa2
      complexed with 3oo, edo, unx
    3. 2378484Domain d4rg2b1: 4rg2 B:1483-1537 [263863]
      Other proteins in same PDB: d4rg2b3
      automated match to d1ssfa1
      complexed with 3oo, edo, unx
    4. 2378485Domain d4rg2b2: 4rg2 B:1538-1602 [263864]
      Other proteins in same PDB: d4rg2b3
      automated match to d1ssfa2
      complexed with 3oo, edo, unx
  7. Domain(s) for 5j26:
    1. 2378506Domain d5j26a1: 5j26 A:1487-1537 [327156]
      Other proteins in same PDB: d5j26b_
      automated match to d2lvma1
    2. 2378507Domain d5j26a2: 5j26 A:1538-1603 [327157]
      Other proteins in same PDB: d5j26b_
      automated match to d1ssfa2
  8. Domain(s) for 5z78:
    1. 3053262Domain d5z78c1: 5z78 C:1484-1537 [353324]
      Other proteins in same PDB: d5z78a1, d5z78a2, d5z78b_, d5z78c3
      automated match to d2lvma1
      protein/DNA complex
    2. 3053263Domain d5z78c2: 5z78 C:1538-1603 [353325]
      Other proteins in same PDB: d5z78a1, d5z78a2, d5z78b_, d5z78c3
      automated match to d1ssfa2
      protein/DNA complex
  9. Domain(s) for 5zcj:
    1. 3053999Domain d5zcjc1: 5zcj C:1486-1537 [354061]
      Other proteins in same PDB: d5zcja_, d5zcjb_
      automated match to d2lvma1
    2. 3054000Domain d5zcjc2: 5zcj C:1538-1606 [354062]
      Other proteins in same PDB: d5zcja_, d5zcjb_
      automated match to d1ssfa2
  10. Domain(s) for 6co1:
    1. 3053162Domain d6co1e1: 6co1 E:1484-1537 [353224]
      Other proteins in same PDB: d6co1a_, d6co1b_, d6co1c_, d6co1d_
      automated match to d2lvma1
      protein/DNA complex
    2. 3053163Domain d6co1e2: 6co1 E:1538-1603 [353225]
      Other proteins in same PDB: d6co1a_, d6co1b_, d6co1c_, d6co1d_
      automated match to d1ssfa2
      protein/DNA complex
    3. 3053171Domain d6co1f1: 6co1 F:1485-1537 [353233]
      Other proteins in same PDB: d6co1a_, d6co1b_, d6co1c_, d6co1d_
      automated match to d2lvma1
      protein/DNA complex
    4. 3053172Domain d6co1f2: 6co1 F:1538-1603 [353234]
      Other proteins in same PDB: d6co1a_, d6co1b_, d6co1c_, d6co1d_
      automated match to d1ssfa2
      protein/DNA complex
  11. Domain(s) for 6co2:
    1. 3053131Domain d6co2c1: 6co2 C:1485-1537 [353193]
      automated match to d2lvma1
      protein/RNA complex
    2. 3053132Domain d6co2c2: 6co2 C:1538-1602 [353194]
      automated match to d1ssfa2
      protein/RNA complex
    3. 3053136Domain d6co2d1: 6co2 D:1486-1537 [353198]
      automated match to d2lvma1
      protein/RNA complex
    4. 3053137Domain d6co2d2: 6co2 D:1538-1603 [353199]
      automated match to d1ssfa2
      protein/RNA complex
  12. Domain(s) for 6mxx:
    1. 3077326Domain d6mxxd1: 6mxx D:1484-1537 [377388]
      Other proteins in same PDB: d6mxxc3, d6mxxj3
      automated match to d2lvma1
      protein/DNA complex; complexed with fmt, k6p, po4
    2. 3077327Domain d6mxxd2: 6mxx D:1538-1603 [377389]
      Other proteins in same PDB: d6mxxc3, d6mxxj3
      automated match to d1ssfa2
      protein/DNA complex; complexed with fmt, k6p, po4
    3. 3077328Domain d6mxxc1: 6mxx C:1484-1537 [377390]
      Other proteins in same PDB: d6mxxc3, d6mxxj3
      automated match to d2lvma1
      protein/DNA complex; complexed with fmt, k6p, po4
    4. 3077329Domain d6mxxc2: 6mxx C:1538-1602 [377391]
      Other proteins in same PDB: d6mxxc3, d6mxxj3
      automated match to d1ssfa2
      protein/DNA complex; complexed with fmt, k6p, po4
    5. 3077337Domain d6mxxj1: 6mxx J:1484-1537 [377399]
      Other proteins in same PDB: d6mxxc3, d6mxxj3
      automated match to d2lvma1
      protein/DNA complex; complexed with fmt, k6p, po4
    6. 3077338Domain d6mxxj2: 6mxx J:1538-1602 [377400]
      Other proteins in same PDB: d6mxxc3, d6mxxj3
      automated match to d1ssfa2
      protein/DNA complex; complexed with fmt, k6p, po4
    7. 3077345Domain d6mxxh1: 6mxx H:1484-1537 [377407]
      Other proteins in same PDB: d6mxxc3, d6mxxj3
      automated match to d2lvma1
      protein/DNA complex; complexed with fmt, k6p, po4
    8. 3077346Domain d6mxxh2: 6mxx H:1538-1602 [377408]
      Other proteins in same PDB: d6mxxc3, d6mxxj3
      automated match to d1ssfa2
      protein/DNA complex; complexed with fmt, k6p, po4
    9. 3077353Domain d6mxxe1: 6mxx E:1484-1537 [377415]
      Other proteins in same PDB: d6mxxc3, d6mxxj3
      automated match to d2lvma1
      protein/DNA complex; complexed with fmt, k6p, po4
    10. 3077354Domain d6mxxe2: 6mxx E:1538-1603 [377416]
      Other proteins in same PDB: d6mxxc3, d6mxxj3
      automated match to d1ssfa2
      protein/DNA complex; complexed with fmt, k6p, po4
    11. 3077358Domain d6mxxa1: 6mxx A:1484-1537 [377420]
      Other proteins in same PDB: d6mxxc3, d6mxxj3
      automated match to d2lvma1
      protein/DNA complex; complexed with fmt, k6p, po4
    12. 3077359Domain d6mxxa2: 6mxx A:1538-1603 [377421]
      Other proteins in same PDB: d6mxxc3, d6mxxj3
      automated match to d1ssfa2
      protein/DNA complex; complexed with fmt, k6p, po4
    13. 3077375Domain d6mxxf1: 6mxx F:1484-1537 [377437]
      Other proteins in same PDB: d6mxxc3, d6mxxj3
      automated match to d2lvma1
      protein/DNA complex; complexed with fmt, k6p, po4
    14. 3077376Domain d6mxxf2: 6mxx F:1538-1603 [377438]
      Other proteins in same PDB: d6mxxc3, d6mxxj3
      automated match to d1ssfa2
      protein/DNA complex; complexed with fmt, k6p, po4
    15. 3077382Domain d6mxxi1: 6mxx I:1485-1537 [377444]
      Other proteins in same PDB: d6mxxc3, d6mxxj3
      automated match to d2lvma1
      protein/DNA complex; complexed with fmt, k6p, po4
    16. 3077383Domain d6mxxi2: 6mxx I:1538-1602 [377445]
      Other proteins in same PDB: d6mxxc3, d6mxxj3
      automated match to d1ssfa2
      protein/DNA complex; complexed with fmt, k6p, po4
    17. 3077402Domain d6mxxg1: 6mxx G:1484-1537 [377464]
      Other proteins in same PDB: d6mxxc3, d6mxxj3
      automated match to d2lvma1
      protein/DNA complex; complexed with fmt, k6p, po4
    18. 3077403Domain d6mxxg2: 6mxx G:1538-1602 [377465]
      Other proteins in same PDB: d6mxxc3, d6mxxj3
      automated match to d1ssfa2
      protein/DNA complex; complexed with fmt, k6p, po4
    19. 3077415Domain d6mxxb1: 6mxx B:1484-1537 [377477]
      Other proteins in same PDB: d6mxxc3, d6mxxj3
      automated match to d2lvma1
      protein/DNA complex; complexed with fmt, k6p, po4
    20. 3077416Domain d6mxxb2: 6mxx B:1538-1602 [377478]
      Other proteins in same PDB: d6mxxc3, d6mxxj3
      automated match to d1ssfa2
      protein/DNA complex; complexed with fmt, k6p, po4
  13. Domain(s) for 6mxy:
    1. 3077314Domain d6mxyb1: 6mxy B:1484-1537 [377376]
      Other proteins in same PDB: d6mxya3, d6mxyb3
      automated match to d2lvma1
      protein/DNA complex; complexed with k6m, po4
    2. 3077315Domain d6mxyb2: 6mxy B:1538-1603 [377377]
      Other proteins in same PDB: d6mxya3, d6mxyb3
      automated match to d1ssfa2
      protein/DNA complex; complexed with k6m, po4
    3. 3077317Domain d6mxya1: 6mxy A:1484-1537 [377379]
      Other proteins in same PDB: d6mxya3, d6mxyb3
      automated match to d2lvma1
      protein/DNA complex; complexed with k6m, po4
    4. 3077318Domain d6mxya2: 6mxy A:1538-1603 [377380]
      Other proteins in same PDB: d6mxya3, d6mxyb3
      automated match to d1ssfa2
      protein/DNA complex; complexed with k6m, po4
  14. Domain(s) for 6mxz:
    1. 3077331Domain d6mxzh1: 6mxz H:1484-1537 [377393]
      Other proteins in same PDB: d6mxze3, d6mxzg3
      automated match to d2lvma1
      protein/DNA complex; complexed with fmt, k6s
    2. 3077332Domain d6mxzh2: 6mxz H:1538-1602 [377394]
      Other proteins in same PDB: d6mxze3, d6mxzg3
      automated match to d1ssfa2
      protein/DNA complex; complexed with fmt, k6s
    3. 3077334Domain d6mxzj1: 6mxz J:1485-1537 [377396]
      Other proteins in same PDB: d6mxze3, d6mxzg3
      automated match to d2lvma1
      protein/DNA complex; complexed with fmt, k6s
    4. 3077335Domain d6mxzj2: 6mxz J:1538-1602 [377397]
      Other proteins in same PDB: d6mxze3, d6mxzg3
      automated match to d1ssfa2
      protein/DNA complex; complexed with fmt, k6s
    5. 3077340Domain d6mxzg1: 6mxz G:1484-1537 [377402]
      Other proteins in same PDB: d6mxze3, d6mxzg3
      automated match to d2lvma1
      protein/DNA complex; complexed with fmt, k6s
    6. 3077341Domain d6mxzg2: 6mxz G:1538-1603 [377403]
      Other proteins in same PDB: d6mxze3, d6mxzg3
      automated match to d1ssfa2
      protein/DNA complex; complexed with fmt, k6s
    7. 3077343Domain d6mxza1: 6mxz A:1485-1537 [377405]
      Other proteins in same PDB: d6mxze3, d6mxzg3
      automated match to d2lvma1
      protein/DNA complex; complexed with fmt, k6s
    8. 3077344Domain d6mxza2: 6mxz A:1538-1603 [377406]
      Other proteins in same PDB: d6mxze3, d6mxzg3
      automated match to d1ssfa2
      protein/DNA complex; complexed with fmt, k6s
    9. 3077347Domain d6mxze1: 6mxz E:1484-1537 [377409]
      Other proteins in same PDB: d6mxze3, d6mxzg3
      automated match to d2lvma1
      protein/DNA complex; complexed with fmt, k6s
    10. 3077348Domain d6mxze2: 6mxz E:1538-1602 [377410]
      Other proteins in same PDB: d6mxze3, d6mxzg3
      automated match to d1ssfa2
      protein/DNA complex; complexed with fmt, k6s
    11. 3077355Domain d6mxzb1: 6mxz B:1484-1537 [377417]
      Other proteins in same PDB: d6mxze3, d6mxzg3
      automated match to d2lvma1
      protein/DNA complex; complexed with fmt, k6s
    12. 3077356Domain d6mxzb2: 6mxz B:1538-1603 [377418]
      Other proteins in same PDB: d6mxze3, d6mxzg3
      automated match to d1ssfa2
      protein/DNA complex; complexed with fmt, k6s
    13. 3077360Domain d6mxzi1: 6mxz I:1484-1537 [377422]
      Other proteins in same PDB: d6mxze3, d6mxzg3
      automated match to d2lvma1
      protein/DNA complex; complexed with fmt, k6s
    14. 3077361Domain d6mxzi2: 6mxz I:1538-1603 [377423]
      Other proteins in same PDB: d6mxze3, d6mxzg3
      automated match to d1ssfa2
      protein/DNA complex; complexed with fmt, k6s
    15. 3077370Domain d6mxzd1: 6mxz D:1484-1537 [377432]
      Other proteins in same PDB: d6mxze3, d6mxzg3
      automated match to d2lvma1
      protein/DNA complex; complexed with fmt, k6s
    16. 3077371Domain d6mxzd2: 6mxz D:1538-1603 [377433]
      Other proteins in same PDB: d6mxze3, d6mxzg3
      automated match to d1ssfa2
      protein/DNA complex; complexed with fmt, k6s
    17. 3077387Domain d6mxzc1: 6mxz C:1484-1537 [377449]
      Other proteins in same PDB: d6mxze3, d6mxzg3
      automated match to d2lvma1
      protein/DNA complex; complexed with fmt, k6s
    18. 3077388Domain d6mxzc2: 6mxz C:1538-1602 [377450]
      Other proteins in same PDB: d6mxze3, d6mxzg3
      automated match to d1ssfa2
      protein/DNA complex; complexed with fmt, k6s
    19. 3077406Domain d6mxzf1: 6mxz F:1485-1537 [377468]
      Other proteins in same PDB: d6mxze3, d6mxzg3
      automated match to d2lvma1
      protein/DNA complex; complexed with fmt, k6s
    20. 3077407Domain d6mxzf2: 6mxz F:1538-1603 [377469]
      Other proteins in same PDB: d6mxze3, d6mxzg3
      automated match to d1ssfa2
      protein/DNA complex; complexed with fmt, k6s
  15. Domain(s) for 6my0:
    1. 3077308Domain d6my0b1: 6my0 B:1485-1537 [377370]
      Other proteins in same PDB: d6my0a3
      automated match to d2lvma1
      mutant
    2. 3077309Domain d6my0b2: 6my0 B:1538-1602 [377371]
      Other proteins in same PDB: d6my0a3
      automated match to d1ssfa2
      mutant
    3. 3077310Domain d6my0a1: 6my0 A:1484-1537 [377372]
      Other proteins in same PDB: d6my0a3
      automated match to d2lvma1
      mutant
    4. 3077311Domain d6my0a2: 6my0 A:1538-1603 [377373]
      Other proteins in same PDB: d6my0a3
      automated match to d1ssfa2
      mutant
  16. Domain(s) for 6upt:
    1. 3077132Domain d6upta1: 6upt A:1485-1537 [377194]
      automated match to d2lvma1
      complexed with qfm, unx
    2. 3077133Domain d6upta2: 6upt A:1538-1603 [377195]
      automated match to d1ssfa2
      complexed with qfm, unx
    3. 3077137Domain d6uptb1: 6upt B:1486-1537 [377199]
      automated match to d2lvma1
      complexed with qfm, unx
    4. 3077138Domain d6uptb2: 6upt B:1538-1605 [377200]
      automated match to d1ssfa2
      complexed with qfm, unx
  17. Domain(s) for 6va5:
    1. 3084790Domain d6va5a1: 6va5 A:1484-1537 [384852]
      automated match to d2lvma1
      complexed with gol, qss, so4, unx
    2. 3084791Domain d6va5a2: 6va5 A:1538-1606 [384853]
      automated match to d1ssfa2
      complexed with gol, qss, so4, unx
  18. Domain(s) for 6vip:
    1. 3080525Domain d6vipb1: 6vip B:1484-1537 [380587]
      automated match to d2lvma1
      complexed with qxy, unx
    2. 3080526Domain d6vipb2: 6vip B:1538-1604 [380588]
      automated match to d1ssfa2
      complexed with qxy, unx
    3. 3080535Domain d6vipa1: 6vip A:1485-1537 [380597]
      automated match to d2lvma1
      complexed with qxy, unx
    4. 3080536Domain d6vipa2: 6vip A:1538-1604 [380598]
      automated match to d1ssfa2
      complexed with qxy, unx

More info for Species Human (Homo sapiens) [TaxId:9606] from b.34.9.1 p53-binding protein 1, 53BP1

Timeline for Species Human (Homo sapiens) [TaxId:9606] from b.34.9.1 p53-binding protein 1, 53BP1: