Lineage for Protein: Nickel-containing superoxide dismutase, NiSOD

  1. Root: SCOPe 2.05
  2. 1715731Class a: All alpha proteins [46456] (286 folds)
  3. 1726514Fold a.24: Four-helical up-and-down bundle [47161] (28 superfamilies)
    core: 4 helices; bundle, closed or partly opened, left-handed twist; up-and-down
  4. 1727408Superfamily a.24.22: Nickel-containing superoxide dismutase, NiSOD [109770] (1 family) (S)
    automatically mapped to Pfam PF09055
  5. 1727409Family a.24.22.1: Nickel-containing superoxide dismutase, NiSOD [109771] (2 proteins)
  6. 1727410Protein Nickel-containing superoxide dismutase, NiSOD [109772] (2 species)

Species:

  1. 1727411Streptomyces coelicolor [TaxId:1902] [109774] (3 PDB entries)
    Uniprot P80735
    1. Domains for 1t6i:
      1. 1727427Domain d1t6ia_: 1t6i A: [106571]
      2. 1727428Domain d1t6ib_: 1t6i B: [106572]
      3. 1727429Domain d1t6ic_: 1t6i C: [106573]
    2. Domains for 1t6q:
      1. 1727424Domain d1t6qa_: 1t6q A: [106579]
      2. 1727425Domain d1t6qb_: 1t6q B: [106580]
      3. 1727426Domain d1t6qc_: 1t6q C: [106581]
    3. Domains for 1t6u:
      1. 1727412Domain d1t6ua_: 1t6u A: [106584]
        complexed with ni
      2. 1727413Domain d1t6ub_: 1t6u B: [106585]
        complexed with ni
      3. 1727414Domain d1t6uc_: 1t6u C: [106586]
        complexed with ni
      4. 1727415Domain d1t6ud_: 1t6u D: [106587]
        complexed with ni
      5. 1727416Domain d1t6ue_: 1t6u E: [106588]
        complexed with ni
      6. 1727417Domain d1t6uf_: 1t6u F: [106589]
        complexed with ni
      7. 1727418Domain d1t6ug_: 1t6u G: [106590]
        complexed with ni
      8. 1727419Domain d1t6uh_: 1t6u H: [106591]
        complexed with ni
      9. 1727420Domain d1t6ui_: 1t6u I: [106592]
        complexed with ni
      10. 1727421Domain d1t6uj_: 1t6u J: [106593]
        complexed with ni
      11. 1727422Domain d1t6uk_: 1t6u K: [106594]
        complexed with ni
      12. 1727423Domain d1t6ul_: 1t6u L: [106595]
        complexed with ni
  2. 1727430Streptomyces seoulensis [TaxId:73044] [109773] (5 PDB entries)
    Uniprot P80734
    1. Domains for 1q0d:
      1. 1727461Domain d1q0da_: 1q0d A: [104404]
        complexed with 3ni, so4
      2. 1727462Domain d1q0db_: 1q0d B: [104405]
        complexed with 3ni, so4
      3. 1727463Domain d1q0dc_: 1q0d C: [104406]
        complexed with 3ni, so4
      4. 1727464Domain d1q0dd_: 1q0d D: [104407]
        complexed with 3ni, so4
      5. 1727465Domain d1q0de_: 1q0d E: [104408]
        complexed with 3ni, so4
      6. 1727466Domain d1q0df_: 1q0d F: [104409]
        complexed with 3ni, so4
      7. 1727467Domain d1q0dg_: 1q0d G: [104410]
        complexed with 3ni, so4
      8. 1727468Domain d1q0dh_: 1q0d H: [104411]
        complexed with 3ni, so4
      9. 1727469Domain d1q0di_: 1q0d I: [104412]
        complexed with 3ni, so4
      10. 1727470Domain d1q0dj_: 1q0d J: [104413]
        complexed with 3ni, so4
      11. 1727471Domain d1q0dk_: 1q0d K: [104414]
        complexed with 3ni, so4
      12. 1727472Domain d1q0dl_: 1q0d L: [104415]
        complexed with 3ni, so4
    2. Domains for 1q0f:
      1. 1727449Domain d1q0fa_: 1q0f A: [104416]
        complexed with 3ni, so4
      2. 1727450Domain d1q0fb_: 1q0f B: [104417]
        complexed with 3ni, so4
      3. 1727451Domain d1q0fc_: 1q0f C: [104418]
        complexed with 3ni, so4
      4. 1727452Domain d1q0fd_: 1q0f D: [104419]
        complexed with 3ni, so4
      5. 1727453Domain d1q0fe_: 1q0f E: [104420]
        complexed with 3ni, so4
      6. 1727454Domain d1q0ff_: 1q0f F: [104421]
        complexed with 3ni, so4
      7. 1727455Domain d1q0fg_: 1q0f G: [104422]
        complexed with 3ni, so4
      8. 1727456Domain d1q0fh_: 1q0f H: [104423]
        complexed with 3ni, so4
      9. 1727457Domain d1q0fi_: 1q0f I: [104424]
        complexed with 3ni, so4
      10. 1727458Domain d1q0fj_: 1q0f J: [104425]
        complexed with 3ni, so4
      11. 1727459Domain d1q0fk_: 1q0f K: [104426]
        complexed with 3ni, so4
      12. 1727460Domain d1q0fl_: 1q0f L: [104427]
        complexed with 3ni, so4
    3. Domains for 1q0g:
      1. 1727431Domain d1q0ga_: 1q0g A: [104428]
        complexed with ni, so4
      2. 1727432Domain d1q0gb_: 1q0g B: [104429]
        complexed with ni, so4
      3. 1727433Domain d1q0gc_: 1q0g C: [104430]
        complexed with ni, so4
      4. 1727434Domain d1q0gd_: 1q0g D: [104431]
        complexed with ni, so4
      5. 1727435Domain d1q0ge_: 1q0g E: [104432]
        complexed with ni, so4
      6. 1727436Domain d1q0gf_: 1q0g F: [104433]
        complexed with ni, so4
      7. 1727437Domain d1q0gg_: 1q0g G: [104434]
        complexed with ni, so4
      8. 1727438Domain d1q0gh_: 1q0g H: [104435]
        complexed with ni, so4
      9. 1727439Domain d1q0gi_: 1q0g I: [104436]
        complexed with ni, so4
      10. 1727440Domain d1q0gj_: 1q0g J: [104437]
        complexed with ni, so4
      11. 1727441Domain d1q0gk_: 1q0g K: [104438]
        complexed with ni, so4
      12. 1727442Domain d1q0gl_: 1q0g L: [104439]
        complexed with ni, so4
    4. Domains for 1q0k:
      1. 1727473Domain d1q0ka_: 1q0k A: [104443]
        complexed with ni, so4, thj
      2. 1727474Domain d1q0kb_: 1q0k B: [104444]
        complexed with ni, so4, thj
      3. 1727475Domain d1q0kc_: 1q0k C: [104445]
        complexed with ni, so4, thj
      4. 1727476Domain d1q0kd_: 1q0k D: [104446]
        complexed with ni, so4, thj
      5. 1727477Domain d1q0ke_: 1q0k E: [104447]
        complexed with ni, so4, thj
      6. 1727478Domain d1q0kf_: 1q0k F: [104448]
        complexed with ni, so4, thj
      7. 1727479Domain d1q0kg_: 1q0k G: [104449]
        complexed with ni, so4, thj
      8. 1727480Domain d1q0kh_: 1q0k H: [104450]
        complexed with ni, so4, thj
      9. 1727481Domain d1q0ki_: 1q0k I: [104451]
        complexed with ni, so4, thj
      10. 1727482Domain d1q0kj_: 1q0k J: [104452]
        complexed with ni, so4, thj
      11. 1727483Domain d1q0kk_: 1q0k K: [104453]
        complexed with ni, so4, thj
      12. 1727484Domain d1q0kl_: 1q0k L: [104454]
        complexed with ni, so4, thj
    5. Domains for 1q0m:
      1. 1727443Domain d1q0ma_: 1q0m A: [104458]
        complexed with acy, ni, so4
      2. 1727444Domain d1q0mb_: 1q0m B: [104459]
        complexed with acy, ni, so4
      3. 1727445Domain d1q0mc_: 1q0m C: [104460]
        complexed with acy, ni, so4
      4. 1727446Domain d1q0md_: 1q0m D: [104461]
        complexed with acy, ni, so4
      5. 1727447Domain d1q0me_: 1q0m E: [104462]
        complexed with acy, ni, so4
      6. 1727448Domain d1q0mf_: 1q0m F: [104463]
        complexed with acy, ni, so4

More info for Protein Nickel-containing superoxide dismutase, NiSOD from a.24.22.1: Nickel-containing superoxide dismutase, NiSOD

Timeline for Protein Nickel-containing superoxide dismutase, NiSOD from a.24.22.1: Nickel-containing superoxide dismutase, NiSOD:

  • Protein Nickel-containing superoxide dismutase, NiSOD from a.24.22.1: Nickel-containing superoxide dismutase, NiSOD first appeared in SCOP 1.69
  • Protein Nickel-containing superoxide dismutase, NiSOD from a.24.22.1: Nickel-containing superoxide dismutase, NiSOD appears in SCOPe 2.04
  • Protein Nickel-containing superoxide dismutase, NiSOD from a.24.22.1: Nickel-containing superoxide dismutase, NiSOD appears in SCOPe 2.06
  • Protein Nickel-containing superoxide dismutase, NiSOD from a.24.22.1: Nickel-containing superoxide dismutase, NiSOD appears in the current release, SCOPe 2.07