SCOP 1.69: Domain d1x8md_: 1x8m D:

Lineage for d1x8md_ (1x8m D:)

1. Root: SCOP 1.69

2. Class b: All beta proteins [48724] (144 folds)

3. Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
   one turn of helix is made by two pairs of antiparallel strands linked with short turns
   has appearance of a sandwich of distinct architecture and jelly-roll topology

4. Superfamily b.82.1: RmlC-like cupins [51182] (13 families)

5. Family b.82.1.13: KduI-like (Pfam 04962) [110318] (1 protein)
   duplication: consists of two germin-like domains

6. Protein 5-keto-4-deoxyuronate isomerase KduI [110319] (1 species)

7. Species Escherichia coli [TaxId:562] [110320] (1 PDB entry)

8. Domain d1x8md_: 1x8m D: [109519]

Details for d1x8md_

PDB Entry: 1x8m, 2.6 Å

PDB Description: x-ray structure of pectin degrading enzyme 5-keto 4-deoxyuronate isomerase from escherichia coli

SCOP Domain Sequences for d1x8md_:

Sequence, based on SEQRES records:

>d1x8md_ b.82.1.13 (D:) 5-keto-4-deoxyuronate isomerase KduI {Escherichia coli}
sldvrqsihsahaktldtqglrneflvekvfvadeytmvyshidriivggimpitktvsv
ggevgkqlgvsyflerrelgviniggagtitvdgqcyeighrdalyvgkgakevvfasid
tgtpakfyyncapahttyptkkvtpdevspvtlgdnltsnrrtinkyfvpdvletcqlsm
gltelapgnlwntmpchtherrmevyfyfnmdddacvfhmmgqpqetrhivmhneqavis
pswsihsgvgtkaytfiwgmvgenqvf

Sequence, based on observed residues (ATOM records):

>d1x8md_ b.82.1.13 (D:) 5-keto-4-deoxyuronate isomerase KduI {Escherichia coli}
sldvrqsihsahaktldtqglrneflvekvfvadeytmvyshidriivggimpitktvsv
ggevgkqlgvsyflerrelgviniggagtitvdgqcyeighrdalyvgkgakevvfasid
tgtpakfyyncapahttyptkkvtpdevspvtlgdnltsnrrtinkyfvpdvletcqlsm
gltelapgnlwntrmevyfyfnmdddacvfhmmgqpqetrhivmhneqavispswsihsg
vgtkaytfiwgmvgenqvf

Timeline for d1x8md_:

• d1x8md_ is new in SCOP 1.69
  
• d1x8md_ appears in SCOP 1.71
  
• d1x8md_ appears in the current release, SCOPe 2.08, called d1x8md1