SCOPe 2.08: Domain d1wdua_: 1wdu A:

Lineage for d1wdua_ (1wdu A:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.151: DNase I-like [56218] (1 superfamily)
   contains beta-sandwich; duplication of alpha+beta motif

4. Superfamily d.151.1: DNase I-like [56219] (4 families)

5. Family d.151.1.1: DNase I-like [56220] (7 proteins)

6. Protein Endonuclease domain of TRAS1 retrotransposon (ORF2) [111215] (1 species)

7. Species Silkworm (Bombyx mori) [TaxId:7091] [111216] (1 PDB entry)
   Uniprot Q93139 1-184

8. Domain d1wdua_: 1wdu A: [109286]
   complexed with cl, po4

Details for d1wdua_

PDB Entry: 1wdu, 2.4 Å

PDB Description: endonuclease domain of tras1, a telomere-specific non-ltr retrotransposon

PDB Compounds: (A:) TRAS1 ORF2p

SCOPe Domain Sequences for d1wdua_:

Sequence, based on SEQRES records:

>d1wdua_ d.151.1.1 (A:) Endonuclease domain of TRAS1 retrotransposon (ORF2) {Silkworm (Bombyx mori) [TaxId: 7091]}
ppyrvlqanlqrkklataelaieaatrkaaialiqepyvggaksmkgfrgvrvfqstaqg
dgtvkaaiavfdhdldviqypqlttnnivvvgirtraweitlvsyyfepdkpiesyleqi
krverkmgpkrlifggdanakstwwgskeddargdqlmgtlgelglhilnegdvptfdti
rggkryqsrvdvtfctedmldlidgwrvdedlvssdhngmvfnirlqk

Sequence, based on observed residues (ATOM records):

>d1wdua_ d.151.1.1 (A:) Endonuclease domain of TRAS1 retrotransposon (ORF2) {Silkworm (Bombyx mori) [TaxId: 7091]}
ppyrvlqanlqrkklataelaieaatrkaaialiqepyvkgfrgvrvfqstaqgdgtvka
aiavfdhdldviqypqlttnnivvvgirtraweitlvsyyfepdkpiesyleqikrverk
mgpkrlifggdanakstwwgskeddargdqlmgtlgelglhilnegdvptfdtryqsrvd
vtfctedmldlidgwrvdedlvssdhngmvfnirlqk

Timeline for d1wdua_:

• d1wdua_ first appeared in SCOP 1.69
  
• d1wdua_ appears in SCOPe 2.07