Lineage for d1wdkb1 (1wdk B:497-620)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2003567Fold a.100: 6-phosphogluconate dehydrogenase C-terminal domain-like [48178] (1 superfamily)
    multihelical; common core is formed around two long antiparallel helices related by (pseudo) twofold symmetry
  4. 2003568Superfamily a.100.1: 6-phosphogluconate dehydrogenase C-terminal domain-like [48179] (13 families) (S)
    N-terminal domain is Rossmann-fold with a family-specific C-terminal extension
  5. 2003630Family a.100.1.3: HCDH C-domain-like [48187] (2 protein domains)
  6. 2003631Protein Fatty oxidation complex alpha subunit, C-terminal domain [109949] (1 species)
    duplication: contains two repeats of this domain
  7. 2003632Species Pseudomonas fragi [TaxId:296] [109950] (4 PDB entries)
    Uniprot P28793
  8. 2003635Domain d1wdkb1: 1wdk B:497-620 [109254]
    Other proteins in same PDB: d1wdka3, d1wdka4, d1wdkb3, d1wdkb4, d1wdkc1, d1wdkc2, d1wdkd1, d1wdkd2
    complexed with aco, hg, n8e, nad, zn

Details for d1wdkb1

PDB Entry: 1wdk (more details), 2.5 Å

PDB Description: fatty acid beta-oxidation multienzyme complex from Pseudomonas fragi, form I (native2)
PDB Compounds: (B:) Fatty oxidation complex alpha subunit

SCOPe Domain Sequences for d1wdkb1:

Sequence, based on SEQRES records: (download)

>d1wdkb1 a.100.1.3 (B:497-620) Fatty oxidation complex alpha subunit, C-terminal domain {Pseudomonas fragi [TaxId: 296]}
gflvnrvlfpyfggfaklvsagvdfvridkvmekfgwpmgpaylmdvvgidtghhgrdvm
aegfpdrmkddrrsaidalyeakrlgqkngkgfyayeadkkgkqkklvdssvlevlkpiv
yeqr

Sequence, based on observed residues (ATOM records): (download)

>d1wdkb1 a.100.1.3 (B:497-620) Fatty oxidation complex alpha subunit, C-terminal domain {Pseudomonas fragi [TaxId: 296]}
gflvnrvlfpyfggfaklvsagvdfvridkvmekfgwpmgpaylmdvvgidtghhgrdvm
aegfpdrmkddrrsaidalyeakrlgqkngkgfyayeadqkklvdssvlevlkpivyeqr

SCOPe Domain Coordinates for d1wdkb1:

Click to download the PDB-style file with coordinates for d1wdkb1.
(The format of our PDB-style files is described here.)

Timeline for d1wdkb1: