SCOPe 2.08: Domain d1wdka1: 1wdk A:497-620

Lineage for d1wdka1 (1wdk A:497-620)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.100: 6-phosphogluconate dehydrogenase C-terminal domain-like [48178] (1 superfamily)
   multihelical; common core is formed around two long antiparallel helices related by (pseudo) twofold symmetry

4. Superfamily a.100.1: 6-phosphogluconate dehydrogenase C-terminal domain-like [48179] (13 families)
   N-terminal domain is Rossmann-fold with a family-specific C-terminal extension

5. Family a.100.1.3: HCDH C-domain-like [48187] (2 proteins)

6. Protein Fatty oxidation complex alpha subunit, C-terminal domain [109949] (1 species)
   duplication: contains two repeats of this domain

7. Species Pseudomonas fragi [TaxId:296] [109950] (4 PDB entries)
   Uniprot P28793

8. Domain d1wdka1: 1wdk A:497-620 [109250]
   Other proteins in same PDB: d1wdka3, d1wdka4, d1wdkb3, d1wdkb4, d1wdkc1, d1wdkc2, d1wdkd1, d1wdkd2
   complexed with aco, hg, n8e, nad, zn

Details for d1wdka1

PDB Entry: 1wdk, 2.5 Å

PDB Description: fatty acid beta-oxidation multienzyme complex from Pseudomonas fragi, form I (native2)

PDB Compounds: (A:) Fatty oxidation complex alpha subunit

SCOPe Domain Sequences for d1wdka1:

Sequence, based on SEQRES records:

>d1wdka1 a.100.1.3 (A:497-620) Fatty oxidation complex alpha subunit, C-terminal domain {Pseudomonas fragi [TaxId: 296]}
gflvnrvlfpyfggfaklvsagvdfvridkvmekfgwpmgpaylmdvvgidtghhgrdvm
aegfpdrmkddrrsaidalyeakrlgqkngkgfyayeadkkgkqkklvdssvlevlkpiv
yeqr

Sequence, based on observed residues (ATOM records):

>d1wdka1 a.100.1.3 (A:497-620) Fatty oxidation complex alpha subunit, C-terminal domain {Pseudomonas fragi [TaxId: 296]}
gflvnrvlfpyfggfaklvsagvdfvridkvmekfgwpmgpaylmdvvgidtghhgrdvm
aegfpdrmkddrrsaidalyeakrlgqkngkgfyayekklvdssvlevlkpivyeqr

Timeline for d1wdka1:

• d1wdka1 first appeared in SCOP 1.69
  
• d1wdka1 appears in SCOPe 2.07