SCOPe 2.07: Domain d1w2w.4: 1w2w M:,N:

Lineage for d1w2w.4 (1w2w M:,N:)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.124: NagB/RpiA/CoA transferase-like [100949] (1 superfamily)
   core: 3 layers: a/b/a; parallel or mixed beta-sheet of 6 strands, order 321456

4. Superfamily c.124.1: NagB/RpiA/CoA transferase-like [100950] (9 families)

5. Family c.124.1.5: IF2B-like [110513] (5 proteins)
   Pfam PF01008; contains extra N-terminal alpha+beta domain (1-126); beta(3)-alpha(5); 3 layers: b/a/a

6. Protein Putative methylthioribose-1-phosphate isomerase Ypr118W [110516] (1 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [110517] (1 PDB entry)
   Uniprot Q06489

8. Domain d1w2w.4: 1w2w M:,N: [109133]
   complexed with so4

Details for d1w2w.4

PDB Entry: 1w2w, 1.75 Å

PDB Description: crystal structure of yeast ypr118w, a methylthioribose-1-phosphate isomerase related to regulatory eif2b subunits

PDB Compounds: (M:) 5-methylthioribose-1-phosphate isomerase, (N:) 5-methylthioribose-1-phosphate isomerase

SCOPe Domain Sequences for d1w2w.4:

Sequence; same for both SEQRES and ATOM records:

>g1w2w.4 c.124.1.5 (M:,N:) Putative methylthioribose-1-phosphate isomerase Ypr118W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
sleaivfdrsepenvsvkvldqlllpyttkyvpihtiddgysviksmqvrgapaiaivgs
lsvltevqlikhnptsdvatlyslvnwestktvlnkrldfllssrptavnlsnslveikn
ilksssdlkafdgslynyvcelidedlannmkmgdngakylidvlqkdgfkdefavltic
ntgslatsgygtalgvirslwkdslaktdkXcprmghvfpletrpynqgsrltayelvyd
kipstlitdssiayrirtspipikaafvgadrivrngdtankigtlqlavickqfgikff
vvapkttidnvtetgddiiveernpeefkvvtgtvinpengslilnesgepitgkvgiap
leinvwnpafditphelidgiiteegvftknssgefqleslf

Timeline for d1w2w.4:

• d1w2w.4 first appeared in SCOP 1.69
  
• d1w2w.4 appears in SCOPe 2.06
  
• d1w2w.4 appears in the current release, SCOPe 2.08