Lineage for d1vzib1 (1vzi B:38-125)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2739517Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2764803Superfamily b.1.13: Superoxide reductase-like [49367] (2 families) (S)
  5. 2764804Family b.1.13.1: Superoxide reductase-like [49368] (3 proteins)
    binds iron in the site that is topologically equivalent to the copper-binding site of cupredoxins
    automatically mapped to Pfam PF01880
  6. 2764805Protein Desulfoferrodoxin C-terminal domain [49371] (2 species)
  7. 2764806Species Desulfoarculus baarsii (Desulfovibrio baarsii) [TaxId:887] [110068] (3 PDB entries)
    Uniprot Q46495
  8. 2764808Domain d1vzib1: 1vzi B:38-125 [108969]
    Other proteins in same PDB: d1vzia2, d1vzib2
    complexed with ca, cl, fe2

Details for d1vzib1

PDB Entry: 1vzi (more details), 1.15 Å

PDB Description: structure of superoxide reductase bound to ferrocyanide and active site expansion upon x-ray induced photoreduction
PDB Compounds: (B:) desulfoferrodoxin

SCOPe Domain Sequences for d1vzib1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1vzib1 b.1.13.1 (B:38-125) Desulfoferrodoxin C-terminal domain {Desulfoarculus baarsii (Desulfovibrio baarsii) [TaxId: 887]}

SCOPe Domain Coordinates for d1vzib1:

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(The format of our PDB-style files is described here.)

Timeline for d1vzib1:

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