SCOPe 2.06: Domain d1vyvb2: 1vyv B:216-402

Lineage for d1vyvb2 (1vyv B:216-402)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.1: Nucleotide and nucleoside kinases [52541] (21 proteins)
   parallel beta-sheet of 5 strands, order 23145

6. Protein Guanylate kinase-like domain of the L-type calcium channel [110527] (2 species)

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [110529] (5 PDB entries)
   Uniprot P54287 38-362

8. Domain d1vyvb2: 1vyv B:216-402 [108921]
   Other proteins in same PDB: d1vyva1, d1vyvb1
   beta4 isoform with odd numbering

Details for d1vyvb2

PDB Entry: 1vyv, 3 Å

PDB Description: beta4 subunit of ca2+ channel

PDB Compounds: (B:) calcium channel beta-4subunit

SCOPe Domain Sequences for d1vyvb2:

Sequence, based on SEQRES records:

>d1vyvb2 c.37.1.1 (B:216-402) Guanylate kinase-like domain of the L-type calcium channel {Norway rat (Rattus norvegicus) [TaxId: 10116]}
psmrpvvlvgpslkgyevtdmmqkalfdflkhrfdgrisitrvtadislakrsvlnnpsk
raiiersntksslaevqseierifelarslqlvvldadtinhpaqliktslapiivhvkv
sspkvlqrliksrgksqskhlnvqlvaadklaqcppemfdvildenqledacehlgeyle
aywrath

Sequence, based on observed residues (ATOM records):

>d1vyvb2 c.37.1.1 (B:216-402) Guanylate kinase-like domain of the L-type calcium channel {Norway rat (Rattus norvegicus) [TaxId: 10116]}
psmrpvvlvgpslkgyevtdmmqkalfdflkhrfdgrisitrvtadislaksslaevqse
ierifelarslqlvvldadtinhpaqliktslapiivhvkvsspkvlqrliksrgksqsk
hlnvqlvaadklaqcppemfdvildenqledacehlgeyleaywrath

Timeline for d1vyvb2:

• d1vyvb2 first appeared in SCOP 1.69
  
• d1vyvb2 appears in SCOPe 2.05
  
• d1vyvb2 appears in SCOPe 2.07
  
• d1vyvb2 appears in the current release, SCOPe 2.08