SCOPe 2.04: Domain d1vlya2: 1vly A:3-243

Lineage for d1vlya2 (1vly A:3-243)

1. Root: SCOPe 2.04

2. Class d: Alpha and beta proteins (a+b) [53931] (380 folds)

3. Fold d.250: Folate-binding domain [103024] (1 superfamily)
   duplication: consists of two beta(2)-alpha-beta(3)-alpha subdomains swapped with the first strands

4. Superfamily d.250.1: Folate-binding domain [103025] (2 families)
   some topological similarity to Formylmethanofuran:tetrahydromethanopterin formyltransferase

5. Family d.250.1.1: Aminomethyltransferase folate-binding domain [103026] (4 proteins)

6. Protein Hypothetical protein YgfZ, N-terminal domain [103029] (1 species)

7. Species Escherichia coli [TaxId:562] [103030] (2 PDB entries)
   Uniprot P39179

8. Domain d1vlya2: 1vly A:3-243 [108872]
   Other proteins in same PDB: d1vlya1
   Structural genomics target
   complexed with act, ca, cl, edo

Details for d1vlya2

PDB Entry: 1vly, 1.3 Å

PDB Description: Crystal structure of a putative aminomethyltransferase (ygfz) from escherichia coli at 1.30 A resolution

PDB Compounds: (A:) Unknown protein from 2D-page

SCOPe Domain Sequences for d1vlya2:

Sequence; same for both SEQRES and ATOM records:

>d1vlya2 d.250.1.1 (A:3-243) Hypothetical protein YgfZ, N-terminal domain {Escherichia coli [TaxId: 562]}
ftpfpprqptasarlpltlmtlddwalatitgadsekymqgqvtadvsqmaedqhllaah
cdakgkmwsnlrlfrdgdgfawierrsvrepqltelkkyavfskvtiapddervllgvag
fqaraalanlfselpskekqvvkegattllwfehpaerflivtdeatanmltdklrgeae
lnnsqqwlalnieagfpvidaansgqfipqatnlqalggisfkkgcytgqemvarakfrg
a

Timeline for d1vlya2:

• d1vlya2 first appeared in SCOP 1.69
  
• d1vlya2 appears in SCOPe 2.03
  
• d1vlya2 appears in SCOPe 2.05
  
• d1vlya2 appears in the current release, SCOPe 2.08