Lineage for d1vlrb2 (1vlr B:39-145)

  1. Root: SCOP 1.69
  2. 496776Class d: Alpha and beta proteins (a+b) [53931] (279 folds)
  3. 516673Fold d.246: mRNA decapping enzyme DcpS N-terminal domain [102859] (1 superfamily)
    beta(3)-alpha-beta(3)-alpha; 3 layers a/b/a
  4. 516674Superfamily d.246.1: mRNA decapping enzyme DcpS N-terminal domain [102860] (1 family) (S)
    forms swapped dimer with two 6-stranded antiparallel beta sheets; order 1236[5][4]
  5. 516675Family d.246.1.1: mRNA decapping enzyme DcpS N-terminal domain [102861] (1 protein)
  6. 516676Protein mRNA decapping enzyme DcpS N-terminal domain [102862] (2 species)
  7. 516682Species Mouse (Mus musculus) [TaxId:10090] [110868] (1 PDB entry)
  8. 516684Domain d1vlrb2: 1vlr B:39-145 [108863]
    Other proteins in same PDB: d1vlra1, d1vlrb1
    Structural genomics target

Details for d1vlrb2

PDB Entry: 1vlr (more details), 1.83 Å

PDB Description: Crystal structure of mRNA decapping enzyme (DcpS) from Mus musculus at 1.83 A resolution

SCOP Domain Sequences for d1vlrb2:

Sequence, based on SEQRES records: (download)

>d1vlrb2 d.246.1.1 (B:39-145) mRNA decapping enzyme DcpS N-terminal domain {Mouse (Mus musculus)}
vrlpfsgfrvqkvlresardkiiflhgkvnedsgdthgedavvilektpfqvehvaqllt
gspelklqfsndiystynlfpprhlsdikttvvypatekhlqkymrq

Sequence, based on observed residues (ATOM records): (download)

>d1vlrb2 d.246.1.1 (B:39-145) mRNA decapping enzyme DcpS N-terminal domain {Mouse (Mus musculus)}
vrlpfsgfrvqkvlresardkiiflhgkvneedavvilektpfqvehvaqlltgspelkl
qfsndiystynlfpprhlsdikttvvypatekhlqkymrq

SCOP Domain Coordinates for d1vlrb2:

Click to download the PDB-style file with coordinates for d1vlrb2.
(The format of our PDB-style files is described here.)

Timeline for d1vlrb2:

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Domains from same chain:
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d1vlrb1