Lineage for d1vl4a_ (1vl4 A:)

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2615488Fold d.283: Putative modulator of DNA gyrase, PmbA/TldD [111282] (1 superfamily)
    consists of two different alpha+beta domains; d1: [duplication of alpha-beta(3)-alpha motif; 2 layers: a/b; antiparallel beta-sheet, order: 321456; strands 1, 2, 4 and 5 are twice longer than other secondary structures]; d2 [ complex fold; contains beta-barrel (n=5, S=10)]
  4. 2615489Superfamily d.283.1: Putative modulator of DNA gyrase, PmbA/TldD [111283] (2 families) (S)
  5. 2615490Family d.283.1.1: Putative modulator of DNA gyrase, PmbA/TldD [111284] (2 proteins)
    Pfam PF01523
  6. 2615491Protein PmbA-related protein TM0727 [111285] (1 species)
  7. 2615492Species Thermotoga maritima [TaxId:2336] [111286] (1 PDB entry)
    Uniprot Q9WZI6; d1: 1-214; d2: 215-433
  8. 2615493Domain d1vl4a_: 1vl4 A: [108718]
    Structural genomics target

Details for d1vl4a_

PDB Entry: 1vl4 (more details), 1.95 Å

PDB Description: crystal structure of a putative modulator of a dna gyrase (tm0727) from thermotoga maritima msb8 at 1.95 a resolution
PDB Compounds: (A:) pmbA-related protein

SCOPe Domain Sequences for d1vl4a_:

Sequence, based on SEQRES records: (download)

>d1vl4a_ d.283.1.1 (A:) PmbA-related protein TM0727 {Thermotoga maritima [TaxId: 2336]}
mtfeefkdrlfalakkngvevqisfletrefslrlangdldqytdagkfnveikvlkdgk
tgtfrtqvlenpekcfeealsnlqvkdseekeyffeggkeyremetyvgrfeklsvkekm
dmakkahesaakdervvmvptvmykdmvikkiitntlgldvesqmdggflfamaiardan
prsgswyelartpedlnpeeigkraaeeaisligsktipsgkypvlmrntalldlmemfi
pmisaenvqknlsplkgklgeqvgnpavsikdlpyhpkglsstpfddegvpttekfvlen
gvlktflhnlktarkegveptgngfvggirpvnlmlmpgeksfeellkemdrgvviteve
gmhagansisgefslfakgywvengeiahgveditisgnfldllrkivlvgndvkvsqht
iapsvlvevldva

Sequence, based on observed residues (ATOM records): (download)

>d1vl4a_ d.283.1.1 (A:) PmbA-related protein TM0727 {Thermotoga maritima [TaxId: 2336]}
mtfeefkdrlfalakkngvevqisfletrefslrlangdldqytdagkfnveikvlkdgk
tgtfrtqvlenpekcfeealsnlqvkkeyffeggkeyremetyvgrfeklsvkekmdmak
kahesaakdervvmvptvmykdmvikkiitntlgldvesqmdggflfamaiardanprsg
swyelartpedlnpeeigkraaeeaisligsktipsgkypvlmrntalldlmemfipmis
aenvqknlsplkgklgeqvgnpavsikdlpyhpkglsstpfddegvpttekfvlengvlk
tflhnlktarkegveptgngfvggirpvnlmlmpgeksfeellkemdrgvvitevegmha
gansisgefslfakgywvengeiahgveditisgnfldllrkivlvgndvkvsqhtiaps
vlvevldva

SCOPe Domain Coordinates for d1vl4a_:

Click to download the PDB-style file with coordinates for d1vl4a_.
(The format of our PDB-style files is described here.)

Timeline for d1vl4a_:

View in 3D
Domains from other chains:
(mouse over for more information)
d1vl4b_