SCOP 1.71: Domain d1vkpa_: 1vkp A:

Lineage for d1vkpa_ (1vkp A:)

1. Root: SCOP 1.71

2. Class d: Alpha and beta proteins (a+b) [53931] (286 folds)

3. Fold d.126: Pentein, beta/alpha-propeller [55908] (1 superfamily)
   duplication: composed of 5 alpha-beta(2)-alpha-beta units arranged around pseudo fivefold axis

4. Superfamily d.126.1: Pentein [55909] (6 families)

5. Family d.126.1.6: Porphyromonas-type peptidylarginine deiminase [111155] (2 proteins)
   Pfam 04371; functionally related to the amidinotransferase, similar active site

6. Protein Agmatine iminohydrolase [111156] (1 species)

7. Species Thale-cress (Arabidopsis thaliana) [TaxId:3702] [111157] (1 PDB entry)

8. Domain d1vkpa_: 1vkp A: [108686]

Details for d1vkpa_

PDB Entry: 1vkp, 1.53 Å

PDB Description: x-ray structure of gene product from arabidopsis thaliana at5g08170, agmatine iminohydrolase

SCOP Domain Sequences for d1vkpa_:

Sequence, based on SEQRES records:

>d1vkpa_ d.126.1.6 (A:) Agmatine iminohydrolase {Thale-cress (Arabidopsis thaliana)}
respaehgyympaewdshaqtwigwperqdnwrhnalpaqrvfagvakaiskfepvtvca
spaqwenarkqlpedirvvemsmndswfrdsgptfivrkrpvklsslnrniagidwnfna
wggandgcyndwshdllvsrkilaleriprfqhsmileggsihvdgegtclvteecllnk
nrnphmskeqieeelkkylgvqsfiwlprglygdedtnghidnmccfarpgvvllswtdd
etdpqyersvealsvlsnsidargrkiqviklyipeplymteeessgitqdgeaiprlag
trlaasyvnfyianggiiapqfgdpirdkeairvlsdtfphhsvvgienareivlaggni
hcitqqqpaept

Sequence, based on observed residues (ATOM records):

>d1vkpa_ d.126.1.6 (A:) Agmatine iminohydrolase {Thale-cress (Arabidopsis thaliana)}
respaehgyympaewdshaqtwigwperqdnwrhnalpaqrvfagvakaiskfepvtvca
spaqwenarkqlpedirvvemsmndswfrdsgptfivrkrnrniagidwnfnawggandg
cyndwshdllvsrkilaleriprfqhsmileggsihvdgegtclvteecllnknrnphms
keqieeelkkylgvqsfiwlprglygdedtnghidnmccfarpgvvllswtddetdpqye
rsvealsvlsnsidargrkiqviklyipeplymteeessgitqdgeaiprlagtrlaasy
vnfyianggiiapqfgdpirdkeairvlsdtfphhsvvgienareivlaggnihcitqqq
paept

Timeline for d1vkpa_:

• d1vkpa_ first appeared in SCOP 1.69
  
• d1vkpa_ appears in SCOP 1.73
  
• d1vkpa_ appears in the current release, SCOPe 2.08