SCOP 1.69: Domain d1vkga_: 1vkg A:

Lineage for d1vkga_ (1vkg A:)

1. Root: SCOP 1.69

2. Class c: Alpha and beta proteins (a/b) [51349] (136 folds)

3. Fold c.42: Arginase/deacetylase [52767] (1 superfamily)
   3 layers: a/b/a, parallel beta-sheet of 8 strands, order 21387456

4. Superfamily c.42.1: Arginase/deacetylase [52768] (2 families)

5. Family c.42.1.2: Histone deacetylase, HDAC [52773] (2 proteins)

6. Protein Histone deacetylase 8, HDAC8 [110587] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [110588] (5 PDB entries)

8. Domain d1vkga_: 1vkg A: [108660]

Details for d1vkga_

PDB Entry: 1vkg, 2.2 Å

PDB Description: Crystal Structure of Human HDAC8 complexed with CRA-19156

SCOP Domain Sequences for d1vkga_:

Sequence, based on SEQRES records:

>d1vkga_ c.42.1.2 (A:) Histone deacetylase 8, HDAC8 {Human (Homo sapiens)}
vpvyiyspeyvsmcdslakipkrasmvhslieayalhkqmrivkpkvasmeematfhtda
ylqhlqkvsqegdddhpdsieyglgydcpategifdyaaaiggatitaaqclidgmckva
inwsggwhhakkdeasgfcylndavlgilrlrrkferilyvdldlhhgdgvedafsftsk
vmtvslhkfspgffpgtgdvsdvglgkgryysvnvpiqdgiqdekyyqicesvlkevyqa
fnpkavvlqlgadtiagdpmcsfnmtpvgigkclkyilqwqlatlilggggynlantarc
wtyltgvilgktlsseipdhefftaygpdyvleitpscrpdrnephriqqilnyikgnlk
hvv

Sequence, based on observed residues (ATOM records):

>d1vkga_ c.42.1.2 (A:) Histone deacetylase 8, HDAC8 {Human (Homo sapiens)}
vpvyiyspeyvsmcdslakipkrasmvhslieayalhkqmrivkpkvasmeematfhtda
ylqhlqkvsqegddategifdyaaaiggatitaaqclidgmckvainwsggwhhakkdea
sgfcylndavlgilrlrrkferilyvdldlhhgdgvedafsftskvmtvslhkfspgffp
gtgdvsdvglgkgryysvnvpiqdgiqdekyyqicesvlkevyqafnpkavvlqlgadti
agdpmcsfnmtpvgigkclkyilqwqlatlilggggynlantarcwtyltgvilgktlss
eipdhefftaygpdyvleitpscrpdrnephriqqilnyikgnlkhvv

Timeline for d1vkga_:

• d1vkga_ is new in SCOP 1.69
  
• d1vkga_ appears in SCOP 1.71
  
• d1vkga_ appears in the current release, SCOPe 2.08