SCOPe 2.08: Domain d1vjva_: 1vjv A:

Lineage for d1vjva_ (1vjv A:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.3: Cysteine proteinases [54000] (1 superfamily)
   consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn

4. Superfamily d.3.1: Cysteine proteinases [54001] (24 families)
   the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet

5. Family d.3.1.9: Ubiquitin carboxyl-terminal hydrolase, UCH [82568] (6 proteins)
   Pfam PF00443

6. Protein Ubiquitin carboxyl-terminal hydrolase 6 [110769] (1 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [110770] (1 PDB entry)
   Uniprot P43593 103-499

8. Domain d1vjva_: 1vjv A: [108632]

Details for d1vjva_

PDB Entry: 1vjv, 1.74 Å

PDB Description: crystal structure of ubiquitin carboxyl-terminal hydrolase 6 (yfr010w) from saccharomyces cerevisiae at 1.74 a resolution

PDB Compounds: (A:) Ubiquitin carboxyl-terminal hydrolase 6

SCOPe Domain Sequences for d1vjva_:

Sequence, based on SEQRES records:

>d1vjva_ d.3.1.9 (A:) Ubiquitin carboxyl-terminal hydrolase 6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
qfaqlpvgfknmgntcylnatlqalyrvndlrdmilnynpsqgvsnsgaqdeeihkqivi
emkrcfenlqnksfksvlpvvllntlrkcypqfaerdsqggfykqqdaeelftqlfhsms
ivfgdkfsedfriqfkttikdtandnditvkenesdsklqchisgttnfmrnglleglne
kiekrsdltgansiysvekkisrlpkfltvqyvrffwkrstnkkskilrkvvfpfqldva
dmltpeyaaekvkvrdelrkvekeknekereikrrkfdpsssenvmtpreqyetqvalne
sekdqwleeykkhfppnlekgenpscvynligvithqgansesghyqafirdeldenkwy
kfnddkvsvvekekieslagggesdsalilmykgfgl

Sequence, based on observed residues (ATOM records):

>d1vjva_ d.3.1.9 (A:) Ubiquitin carboxyl-terminal hydrolase 6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
qfaqlpvgfknmgntcylnatlqalyrvndlrdmilnynpsqgvsnsgaqdeeihkqivi
emkrcfenlqnkfksvlpvvllntlrkcypqfaerdfykqqdaeelftqlfhsmsivfgd
kfsedfriqfkttikdtandnditvkenesdsklqchisgttnfmrnglleglnekansi
ysvekkisrlpkfltvqyvrffwkrstnkkskilrkvvfpfqldvadmltpeyaaekvkv
rdelrkvekeknekvmtpreqyetqvalnesekdqwleeykkhfppnlekgenpscvynl
igvithqgansesghyqafirdeldenkwykfnddkvsvvekekieslagggesdsalil
mykgfgl

Timeline for d1vjva_:

• d1vjva_ first appeared in SCOP 1.69
  
• d1vjva_ appears in SCOPe 2.07