SCOPe 2.08: Domain d1vg0a2: 1vg0 A:445-557

Lineage for d1vg0a2 (1vg0 A:445-557)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.16: FAD-linked reductases, C-terminal domain [54372] (1 superfamily)
   alpha+beta sandwich

4. Superfamily d.16.1: FAD-linked reductases, C-terminal domain [54373] (8 families)
   N-terminal domain is beta/beta/alpha common fold

5. Family d.16.1.6: GDI-like [54399] (2 proteins)
   Similar to FAD-linked reductases in both domains but does not bind FAD

6. Protein Rab escort protein 1 [89845] (1 species)

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [89846] (3 PDB entries)
   Uniprot P37727

8. Domain d1vg0a2: 1vg0 A:445-557 [108597]
   Other proteins in same PDB: d1vg0a1, d1vg0b_
   complexed with cl, gdp, ger, mg, pg4

Details for d1vg0a2

PDB Entry: 1vg0, 2.2 Å

PDB Description: the crystal structures of the rep-1 protein in complex with monoprenylated rab7 protein

PDB Compounds: (A:) Rab proteins geranylgeranyltransferase component A 1

SCOPe Domain Sequences for d1vg0a2:

Sequence, based on SEQRES records:

>d1vg0a2 d.16.1.6 (A:445-557) Rab escort protein 1 {Norway rat (Rattus norvegicus) [TaxId: 10116]}
qyrqisravlitdgsvlrtdadqqvsiltvpaeepgsfavrvielcsstmtcmkgtylvh
ltcmssktaredlervvqklftpyteieaeneqvekprllwalyfnmrdssdi

Sequence, based on observed residues (ATOM records):

>d1vg0a2 d.16.1.6 (A:445-557) Rab escort protein 1 {Norway rat (Rattus norvegicus) [TaxId: 10116]}
qyrqisravlitdgsvlrtdadqqvsiltvpaeepgsfavrvielcsstmtcmkgtylvh
ltcmssktaredlervvqklftpyteiekprllwalyfnmrdssdi

Timeline for d1vg0a2:

• d1vg0a2 first appeared in SCOP 1.69
  
• d1vg0a2 appears in SCOPe 2.07