Lineage for d1vdhb_ (1vdh B:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2516578Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2517142Superfamily d.58.4: Dimeric alpha+beta barrel [54909] (24 families) (S)
    dimerizes through the beta-sheet; forms beta-sheet barrel, closed (n=8, S=12); dimers may assemble in higher oligomers
  5. 2517312Family d.58.4.10: Chlorite dismutase-like [110965] (2 protein domains)
    Pfam PF06778; duplication: consists of two similar domains; forms a pentamer similar to the MLI decamer
  6. 2517313Protein Polyketide synthase CurD homologue TTHA1714/TTC1352 [110968] (1 species)
  7. 2517314Species Thermus thermophilus [TaxId:274] [110969] (1 PDB entry)
    Uniprot Q5SHL6
  8. 2517316Domain d1vdhb_: 1vdh B: [108524]
    Structural genomics target

Details for d1vdhb_

PDB Entry: 1vdh (more details), 2 Å

PDB Description: Structure-based functional identification of a novel heme-binding protein from thermus thermophilus HB8
PDB Compounds: (B:) muconolactone isomerase-like protein

SCOPe Domain Sequences for d1vdhb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1vdhb_ d.58.4.10 (B:) Polyketide synthase CurD homologue TTHA1714/TTC1352 {Thermus thermophilus [TaxId: 274]}

SCOPe Domain Coordinates for d1vdhb_:

Click to download the PDB-style file with coordinates for d1vdhb_.
(The format of our PDB-style files is described here.)

Timeline for d1vdhb_: