SCOPe 2.08: Domain d1vcoa1: 1vco A:298-547

Lineage for d1vcoa1 (1vco A:298-547)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.23: Flavodoxin-like [52171] (15 superfamilies)
   3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345

4. Superfamily c.23.16: Class I glutamine amidotransferase-like [52317] (10 families)
   conserved positions of the oxyanion hole and catalytic nucleophile; different constituent families contain different additional structures

5. Family c.23.16.1: Class I glutamine amidotransferases (GAT) [52318] (12 proteins)
   contains a catalytic Cys-His-Glu triad

6. Protein CTP synthase PyrG, C-terminal domain [110481] (2 species)

7. Species Thermus thermophilus [TaxId:274] [110483] (3 PDB entries)
   Uniprot Q5SIA8

8. Domain d1vcoa1: 1vco A:298-547 [108508]
   Other proteins in same PDB: d1vcoa2
   complexed with gln

Details for d1vcoa1

PDB Entry: 1vco, 2.15 Å

PDB Description: Crystal Structure of T.th. HB8 CTP synthetase complex with Glutamine

PDB Compounds: (A:) CTP synthetase

SCOPe Domain Sequences for d1vcoa1:

Sequence, based on SEQRES records:

>d1vcoa1 c.23.16.1 (A:298-547) CTP synthase PyrG, C-terminal domain {Thermus thermophilus [TaxId: 274]}
ertvkiaiagkyvkmpdaylsllealrhagiknrarvevkwvdaesleaadleeafrdvs
gilvpggfgvrgiegkvraaqyarerkipylgiclglqiaviefarnvaglkganstefd
phtphpvidlmpeqleveglggtmrlgdwpmrikpgtllhrlygkeevlerhrhryevnp
lyvdgleraglvvsattpgmrgrgaglveaielkdhpfflglqshpefksrpmrpsppfv
gfveaalayq

Sequence, based on observed residues (ATOM records):

>d1vcoa1 c.23.16.1 (A:298-547) CTP synthase PyrG, C-terminal domain {Thermus thermophilus [TaxId: 274]}
ertvkiaiagkyvdaylsllealrhagiknrarvevkwvdaesladleeafrdvsgilvp
ggfgvrgiegkvraaqyarerkipylgiclglqiaviefarnvaglkganstefdphtph
pvidlmpeqlevggtmrlgdwpmrikpgtllhrlygkeevlerhrhryevnplyvdgler
aglvvsattpgmrgrgaglveaielkdhpfflglqshpefksrpmrpsppfvgfveaala
yq

Timeline for d1vcoa1:

• d1vcoa1 first appeared in SCOP 1.69
  
• d1vcoa1 appears in SCOPe 2.07