Lineage for d1v9ya_ (1v9y A:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2534513Fold d.110: Profilin-like [55769] (10 superfamilies)
    core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha
  4. 2534777Superfamily d.110.3: PYP-like sensor domain (PAS domain) [55785] (8 families) (S)
    alpha-beta(2)-alpha(2)-beta(3)
  5. 2534860Family d.110.3.2: Heme-binding PAS domain [55789] (3 proteins)
  6. 2534861Protein Direct oxygen sensor protein, DOS [111118] (1 species)
    Heme-regulated cyclic AMP phosphodiesterase; formerly hypothetical protein YddU
  7. 2534862Species Escherichia coli [TaxId:562] [111119] (5 PDB entries)
    Uniprot P76129 8-126 ! Uniprot P76129 12-124
  8. 2534863Domain d1v9ya_: 1v9y A: [108454]
    complexed with hem

Details for d1v9ya_

PDB Entry: 1v9y (more details), 1.32 Å

PDB Description: Crystal Structure of the heme PAS sensor domain of Ec DOS (ferric form)
PDB Compounds: (A:) Heme pas sensor protein

SCOPe Domain Sequences for d1v9ya_:

Sequence, based on SEQRES records: (download)

>d1v9ya_ d.110.3.2 (A:) Direct oxygen sensor protein, DOS {Escherichia coli [TaxId: 562]}
giffpaleqnmmgavlinendevmffnpaaeklwgykreevignnidmliprdlrpahpe
yirhnreggkarvegmsrelqlekkdgskiwtrfalskvsaegkvyylalvrd

Sequence, based on observed residues (ATOM records): (download)

>d1v9ya_ d.110.3.2 (A:) Direct oxygen sensor protein, DOS {Escherichia coli [TaxId: 562]}
giffpaleqnmmgavlinendevmffnpaaeklwgykreevignnidmliprdlrpahpe
yirhnrerelqlekkdgskiwtrfalskvsaegkvyylalvrd

SCOPe Domain Coordinates for d1v9ya_:

Click to download the PDB-style file with coordinates for d1v9ya_.
(The format of our PDB-style files is described here.)

Timeline for d1v9ya_: