Lineage for d1v9fa_ (1v9f A:)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 3009172Fold d.265: Pseudouridine synthase [100877] (1 superfamily)
    consists of two alpha+beta subdomains with some similarity to the ferredoxin-like fold
  4. 3009173Superfamily d.265.1: Pseudouridine synthase [55120] (5 families) (S)
    the active site is the most conserved structural region of the superfamily and is located between the subdomains
  5. 3009217Family d.265.1.3: Pseudouridine synthase RsuA/RluD [75459] (3 proteins)
    contains N-terminal alpha-L RNA-binding motif
  6. 3009222Protein Ribosomal large subunit pseudouridine synthase D, RluD [103019] (1 species)
  7. 3009223Species Escherichia coli [TaxId:562] [103020] (3 PDB entries)
    Uniprot P33643
  8. 3009224Domain d1v9fa_: 1v9f A: [108448]
    complexed with po4

Details for d1v9fa_

PDB Entry: 1v9f (more details), 1.7 Å

PDB Description: Crystal structure of catalytic domain of pseudouridine synthase RluD from Escherichia coli
PDB Compounds: (A:) Ribosomal large subunit pseudouridine synthase D

SCOPe Domain Sequences for d1v9fa_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1v9fa_ d.265.1.3 (A:) Ribosomal large subunit pseudouridine synthase D, RluD {Escherichia coli [TaxId: 562]}

SCOPe Domain Coordinates for d1v9fa_:

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Timeline for d1v9fa_: