SCOPe 2.06: Domain d1v3ha_: 1v3h A:

Lineage for d1v3ha_ (1v3h A:)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
   members of the family may contain various insert subdomains
   in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain

6. Protein beta-Amylase [51481] (3 species)
   Common fold covers whole protein structure

7. Species Soybean (Glycine max) [TaxId:3847] [51482] (18 PDB entries)
   Uniprot P10538

8. Domain d1v3ha_: 1v3h A: [108303]
   complexed with so4

Details for d1v3ha_

PDB Entry: 1v3h, 1.6 Å

PDB Description: the roles of glu186 and glu380 in the catalytic reaction of soybean beta-amylase

PDB Compounds: (A:) beta-amylase

SCOPe Domain Sequences for d1v3ha_:

Sequence; same for both SEQRES and ATOM records:

>d1v3ha_ c.1.8.1 (A:) beta-Amylase {Soybean (Glycine max) [TaxId: 3847]}
snmllnyvpvyvmlplgvvnvdnvfedpdglkeqllqlraagvdgvmvdvwwgiielkgp
kqydwrayrsllqlvqecgltlqaimsfhqcggnvgdivnipipqwvldigesnhdifyt
nrsgtrnkeyltvgvdnepifhgrtaieiysdymksfrenmsdflesgliidievglgpa
gqlrypsypqsqgwefpgigefqcydkylkadfkaavaraghpewelpddagkyndvpes
tgffksngtyvtekgkffltwysnkllnhgdqildeankaflgckvklaikvsgihwwyk
venhaaeltagyynlndrdgyrpiarmlsrhhailnftclemrdseqpsdaksgpqelvq
qvlsggwredirvagenalprydataynqiilnarpqgvnnngppklsmfgvtylrlsdd
llqksnfnifkkfvlkmhadqdycanpqkynhaitplkpsapkipievlleatkptlpfp
wlpetdmkvdg

Timeline for d1v3ha_:

• d1v3ha_ first appeared in SCOP 1.69
  
• d1v3ha_ appears in SCOPe 2.05
  
• d1v3ha_ appears in SCOPe 2.07
  
• d1v3ha_ appears in the current release, SCOPe 2.08