SCOPe 2.06: Domain d1up6b2: 1up6 B:163-415

Lineage for d1up6b2 (1up6 B:163-415)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.162: LDH C-terminal domain-like [56326] (1 superfamily)
   unusual fold, defines family

4. Superfamily d.162.1: LDH C-terminal domain-like [56327] (3 families)

5. Family d.162.1.2: AglA-like glucosidase [90050] (5 proteins)
   family 4 glycosyl hydrolase
   automatically mapped to Pfam PF11975

6. Protein 6-phospho-beta-glucosidase [111254] (2 species)

7. Species Thermotoga maritima [TaxId:2336] [111256] (3 PDB entries)
   Uniprot Q9X108

8. Domain d1up6b2: 1up6 B:163-415 [107979]
   Other proteins in same PDB: d1up6a1, d1up6b1, d1up6c1, d1up6d1, d1up6e1, d1up6f1, d1up6g1, d1up6h1
   complexed with g6p, mn, nad, so4

Details for d1up6b2

PDB Entry: 1up6, 2.55 Å

PDB Description: structure of the 6-phospho-beta glucosidase from thermotoga maritima at 2.55 angstrom resolution in the tetragonal form with manganese, nad+ and glucose-6-phosphate

PDB Compounds: (B:) 6-phospho-beta-glucosidase

SCOPe Domain Sequences for d1up6b2:

Sequence, based on SEQRES records:

>d1up6b2 d.162.1.2 (B:163-415) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}
nvpinfireiaemfsarledvflkyyglnhlsfiekvfvkgedvtekvfenlklklsnip
dedfptwfydsvrlivnpylryylmekkmfkkisthelrarevmkiekelfekyrtavei
peeltkrggsmystaaahlirdletdegkihivntrnngsienlpddyvleipcyvrsgr
vhtlsqgkgdhfalsfihavkmyerltieaylkrskklalkallshplgpdvedakdlle
eileanreyvklg

Sequence, based on observed residues (ATOM records):

>d1up6b2 d.162.1.2 (B:163-415) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}
nvpinfireiaemfsarledvflkyyglnhlsfiekvfvkgedvtekvfenlklklipde
dfptwfydsvrlivnpylryylmekkmfkkisthelrarevmkiekelfekyrtaveipe
eltsmystaaahlirdletdegkihivntrnngsienlpddyvleipcyvrsgrvhtlsq
gkgdhfalsfihavkmyerltieaylkrskklalkallshplgpdvedakdlleeilean
reyvklg

Timeline for d1up6b2:

• d1up6b2 first appeared in SCOP 1.69
  
• d1up6b2 appears in SCOPe 2.05
  
• d1up6b2 appears in SCOPe 2.07
  
• d1up6b2 appears in the current release, SCOPe 2.08