Class d: Alpha and beta proteins (a+b) [53931] (279 folds) |
Fold d.129: TBP-like [55944] (8 superfamilies) beta-alpha-beta(4)-alpha |
Superfamily d.129.3: Bet v1-like [55961] (5 families) contains a single copy of this fold with a alpha-beta2 insertion after the first helix; there is a cavity between the beta-sheet and the long C-terminal helix |
Family d.129.3.3: Ring hydroxylating alpha subunit catalytic domain (Pfam 00848) [55969] (2 proteins) contains a few insertion and C-terminal extension compared with Bet v1 |
Protein Biphenyl dioxygenase large subunit BphA1, C-terminal domain [111166] (1 species) |
Species Rhodococcus sp. strain RHA1 [TaxId:101510] [111167] (2 PDB entries) |
Domain d1ulie2: 1uli E:171-451 [107928] Other proteins in same PDB: d1ulia1, d1ulib_, d1ulic1, d1ulid_, d1ulie1, d1ulif_ |
PDB Entry: 1uli (more details), 2.2 Å
SCOP Domain Sequences for d1ulie2:
Sequence, based on SEQRES records: (download)
>d1ulie2 d.129.3.3 (E:171-451) Biphenyl dioxygenase large subunit BphA1, C-terminal domain {Rhodococcus sp. strain RHA1} apdldtylgeakfymdhmldrteagteaipgiqkwvipcnwkfaaeqfcsdmyhagttsh lsgilaglpdgvdlselapptegiqyratwgghgsgfyigdpnlllaimgpkvteywtqg paaekaserlgstergqqlmaqhmtifptcsflpgintirawhprgpneievwaftvvda dapeemkeeyrqqtlrtfsaggvfeqddgenwveiqqvlrghkarsrpfnaemglgqtds dnpdypgtisyvyseeaarglytqwvrmmtspdwaaldatr
>d1ulie2 d.129.3.3 (E:171-451) Biphenyl dioxygenase large subunit BphA1, C-terminal domain {Rhodococcus sp. strain RHA1} apdldtylgeakfymdhmldrteagteaipgiqkwvipcnwkfaaeqfcsdmyhagttsh lsgilaglptegiqyratwgghgsgfyigdpnlllaimgpkvteywtqgpaaekaserlg stergqqlmaqhmtifptcsflpgintirawhprgpneievwaftvvdadapeemkeeyr qqtlrtfsaggvfeqddgenwveiqqvlrghkarsrpfnaemglgqtdsdnpdypgtisy vyseeaarglytqwvrmmtspdwaaldatr
Timeline for d1ulie2: