Lineage for d1u3da2 (1u3d A:13-197)

  1. Root: SCOPe 2.07
  2. 2434694Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2470051Fold c.28: Cryptochrome/photolyase, N-terminal domain [52424] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32145; Rossmann-like
  4. 2470052Superfamily c.28.1: Cryptochrome/photolyase, N-terminal domain [52425] (2 families) (S)
    automatically mapped to Pfam PF00875
  5. 2470053Family c.28.1.1: Cryptochrome/photolyase, N-terminal domain [52426] (3 proteins)
  6. 2470054Protein Cryptochrome [82367] (3 species)
  7. 2470062Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [110496] (2 PDB entries)
    Uniprot Q43125 13-497
  8. 2470063Domain d1u3da2: 1u3d A:13-197 [107639]
    Other proteins in same PDB: d1u3da1
    complexed with anp, cl, fad, mg, nds

Details for d1u3da2

PDB Entry: 1u3d (more details), 2.45 Å

PDB Description: Crystal Structure of the PHR domain of Cryptochrome 1 from Arabidopsis thaliana with AMPPNP bound
PDB Compounds: (A:) Cryptochrome 1 apoprotein

SCOPe Domain Sequences for d1u3da2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1u3da2 c.28.1.1 (A:13-197) Cryptochrome {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
csivwfrrdlrvednpalaaavragpvialfvwapeeeghyhpgrvsrwwlknslaqlds
slrslgtclitkrstdsvaslldvvkstgasqiffnhlydplslvrdhrakdvltaqgia
vrsfnadllyepwevtdelgrpfsmfaafwerclsmpydpespllppkkiisgdvskcva
dplvf

SCOPe Domain Coordinates for d1u3da2:

Click to download the PDB-style file with coordinates for d1u3da2.
(The format of our PDB-style files is described here.)

Timeline for d1u3da2:

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d1u3da1