SCOPe 2.08: Domain d1u2mb_: 1u2m B:

Lineage for d1u2mb_ (1u2m B:)

1. Root: SCOPe 2.08

2. Class f: Membrane and cell surface proteins and peptides [56835] (69 folds)

3. Fold f.48: OmpH-like [111383] (1 superfamily)
   trimer; one subunit consists of an alpha/beta oligomerization subdomain [3-stranded parallel beta-sheet, order 213], and an antiparallel coiled coil

4. Superfamily f.48.1: OmpH-like [111384] (1 family)
   automatically mapped to Pfam PF03938

5. Family f.48.1.1: OmpH-like [111385] (1 protein)
   Pfam PF03938

6. Protein Periplasmic chaperon skp (HlpA) [111386] (1 species)

7. Species Escherichia coli [TaxId:562] [111387] (2 PDB entries)
   Uniprot P11457

8. Domain d1u2mb_: 1u2m B: [107613]
   Other proteins in same PDB: d1u2ma2, d1u2mc2
   missing some secondary structures that made up less than one-third of the common domain

Details for d1u2mb_

PDB Entry: 1u2m, 2.3 Å

PDB Description: crystal structure of skp

PDB Compounds: (B:) Histone-like protein HLP-1

SCOPe Domain Sequences for d1u2mb_:

Sequence, based on SEQRES records:

>d1u2mb_ f.48.1.1 (B:) Periplasmic chaperon skp (HlpA) {Escherichia coli [TaxId: 562]}
kiaivnmgslfqqvaqktgvsntlenefkgraselqrmetdlqakmkklqsmkagsdrtk
lekdvmaqrqtfaqkaqafeqdrarrsneergklvtriqtavksvansqdidlvvdanav
aynssdvkditadvlkqvk

Sequence, based on observed residues (ATOM records):

>d1u2mb_ f.48.1.1 (B:) Periplasmic chaperon skp (HlpA) {Escherichia coli [TaxId: 562]}
kiaivnmgslfqqvaqktgvsntlenefkgraselqrmetdlqakrqtfaqkaqafeqdr
arrsneergklvtriqtavksvansqdidlvvdanavaynssdvkditadvlkqvk

Timeline for d1u2mb_:

• d1u2mb_ first appeared in SCOP 1.69
  
• d1u2mb_ appears in SCOPe 2.07